Detailed information of aflo_s0009.g69.t1 in Acropora florida

Genomic Location: sc0000009_pilon:1183218...1192019
NR annotation: XP_020601267.1, threonylcarbamoyladenosine tRNA methylthiotransferase-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NS26Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus laevis OX=8355 GN=cdkal1 PE=2 SV=1
Q5VV42Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens OX=9606 GN=CDKAL1 PE=1 SV=1
Q91WE6Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Mus musculus OX=10090 GN=Cdkal1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01938TRAMTRAM domainDomainInterproscan
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023404Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR002792DomainTRAM domainInterproscan
IPR007197DomainRadical SAMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11918RADICAL SAM PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0035598Molecular FunctionN6-threonylcarbomyladenosine methylthiotransferase activityInterproscan
GO:0035600Biological ProcesstRNA methylthiolationInterproscan

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