Gene detail

Detailed information of aflo_s0015.g38.t1 in Acropora florida

Genomic Location: sc0000015_pilon:927756...959372
NR annotation: XP_015753075.1, PREDICTED: uncharacterized protein LOC107332842 isoform X7 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0015.g38.t1

CACCACCTTATTTAGTGAGATTGCTTTCGTATTGTTTGTAGGCTTTACAACTTAAGTATGAAGAGTTGAAAAAGTCGATGGATGAACTCACCACATCATCTGTTGACGGCCTCCTGGAGAAGATACGTTTGTTGGCATCCCGTCCTATTTCTGAATTCAACCGATTTGAGGCGCTGAATATGTTGGAGGCCCTGAAGAATGCAGCTCAGGATGCCAAACATGAGAAGGCGGGATACTATAAGTATACCTTCGAAACTCTGCGCGAGAAAGTTGCCCTGCCAAACGACCAGTTTCGTAATTTCTTGCTCCCCTTATTGGGGGATAAAGATCAAGAACGAGTTCTGGATGTTATCGCCAAGGTCGAAAAGAACAATCGCCGAAATCCGAATTCTCATAGTCACTTGATCTGGGATTGGGAGCTTGATTCCGAGTTTGAAGGAAACCTGCTAGCCTTTACACAGTACTCCCCGAGGTCAGTGAATTGGGTTGATTGGTTAGGAAATCCTGTTGGGGTCAGCACTGGGGTGACAGTCCTAGATCTTCCTGACGGAGAAATCGACCAAATATTTCGTGGAGAAAAACTTGGAGACCCGGCTATTTTACGTTTTAGAGACCCTGGCTGTTTCCGTGCTGGAGAAATCCATAAATATAGTGATCAGTGGAAGCAAATTGCGGGTGATTCTCCGTCTCCTCAACAAGCTCAAGTTTTGAAATGGATAGAGGATGAAGTGTCAATTTTTGAGTATTTTCAACCTTTTTCTGGCAATTTTAAAGGGAAGCAGTACAGCTCTGAACGCCCACCCTCGGAACATTTCAAGAACAATTTGTCATtaggtggagagaagagagaatTTtttgaagaagacaggctgccacctcagcttagtgtcaaggtgatagaactcagtgatgttccatatgaatcctggagtgatgTtaatcTgccaattgatattttactaatagttgagaatgactttgagttatcaagctgtctatcatttctggatcaacctttcaaaagtgacaacaaggaggttggtcatgtgtactttggacgcataggaaatgctagtaatgaagagaagctgaaggttgctttagcgaaatgttcaaaagcagctgcaagcccagagggttctttaacaatggcaatgaAggctgttgaaatattgcagcctaaggcagtattttttgtgggaacttgcaatggtttaagctcaaagaaagtcagcctgggagatgtagttatAccttccaAGctaactgctgcagttgggtccaaagttCttgccagtccacgtctAggtgatcttgctaGagatgtaaccaacAagtgggtGgctcctttgcaaaatCcagatgcattggaagttaaagtacatcatggtggcactatcctgaaacggtcacttacagtggactgcacatatgatgatcttcatgaactgtatcctgaagcaattgctgttgaagcagaaagtgaaggcatttctttcgaagcctacgatgacttcattaagtgggtgatagtaaaaggtgtaaccagttattttaatcaaaccaagtcatcaacctcagaatggatgtcttttgcaagcaccatggcagcctctattgttgccagtatgctgaaacatccagttgttttccagaagtggtcgcactacagccaagcatttagatcgttctctgaagcaagactgagaaagatggaagCTTTAGACGAAGATGAAGAGTTTGAGGACTATTTAGAAGCTGTTGTTGAGGAGGTTCAAAACGAAGGAGTTTGTTGTGAGTTCTGCTCGAAGATTTGTAAAAGTAAGCAAGGCTTAAGTAGACACATAGCTGCCAAACACAAAGACCAGGAACAAGCTACCAAGACTAAAAAGAAGAAGGAGACAGTGTTAAAGTTAAATGCCTTCACTCTAGTGATGCAAATTCTAGTTTTCCACATAATTTAATTTAATAGCTTAAATTAGAGTTCTATTTACATACAAACTCTTACACTACATGTTCCAGTTTCAATGTTTACAGTCTTTAACTTAAGTCTTACAGCTCCAGCTAGAATGCTAAAATTAGATCTAGAATCTTGAATTCTCAATCAGTTATGGATAAATAACTTCATGATAGCTATTTAAGATTTTCTCCTCATGCCCCATAGCTGCAAATTGAATTAAAAGGAAGGGCTTGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46832	5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008782	Molecular Function	adenosylhomocysteine nucleosidase activity	Interproscan
GO:0008930	Molecular Function	methylthioadenosine nucleosidase activity	Interproscan
GO:0019284	Biological Process	L-methionine salvage from S-adenosylmethionine	Interproscan