Detailed information of aflo_s0019.g66.t1 in Acropora florida

Genomic Location: sc0000019_pilon:878375...911373
NR annotation: XP_044176190.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114950879 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9GMB8Serine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=SARS1 PE=2 SV=3
P26638Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3
P26636Serine--tRNA ligase, cytoplasmic OS=Cricetulus griseus OX=10029 GN=SARS1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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