Gene detail

Detailed information of aflo_s0022.g90.t3 in Acropora florida

Genomic Location: sc0000022_pilon:1273644...1288938
NR annotation: XP_015751774.1, PREDICTED: uncharacterized protein LOC107331677 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0022.g90.t3

ATGTCTTATATTTGTGAACATCTCGGTTTCAATTGCTCTACAATTGCAGTAGCAAAGGGGCCTGCTAAAGAATGCAGATGTGAAAGACATGAAAGTAGCGGCAAAGTATATCTCAGAGTGAACTGTTCAAGTTTACAAATGACTCAGATTCCCAATGGTGACCTGCCTGCAACCACAAAACTTCTTGATCTGAGCAGTAACAAGTTACAGAGGATTGAGGGCGCAAATTTTACTGGCCTCCGATTTATTACGGTGTTGGACTTTTCACACAACTACATTTCGAAAATACCTTCAAAGGATATTTCGCGGAAACCTAAACTTGAAATTCTGAAGTTGGGACATAACAACATCTCCGAGGTGACGTTTGGTGCACTTCCCTCTGTTCCTGAGCTCTCATTCTTTGAACCTGCCAGGAAAGTTGTCAACTATGAACTTGCTCTGCCACGCAATATTGAGATTGTCATGTCTTCATCAGGATTCCAATGCACTTACCATGGCAACAACGCCAACACCTGTCGCCCTTGTCCTCTTGGGACATATCAAGTAAACGGAGAATGTATTCCATGTCCAGCAGGTGGCGTGTATCAAGACGAGGTAGGGTACACAGGCAGATCCTCTCATGGCATTGGATGTAAGTCATGCCCGGTGGGACACTATGTGCCACCCACAGCTGCTCCAGGCAAGGCCGTTAGAGAATGTGTTTTGTGTCCACAAGGTACCGATTACTCGCGATACGCCGGTTTCAAAGGTTGCGAGTGCCTTCCGAACTTTTATCGATTGGATCGATTCGGTGGTTGCACACAATGTCCTTTACGAGGCTTGTCGTGTCAAAATGAATCCATCAAACTTCAGCCTGGCTTCTACTGGAAATGGCCGTCAAATAAGAGTCTTGAACTGTACCAGAAGTTTTCTCGGGATCTCATGATCACCGACACTTCATACCGAAGTGAGCGATTTAAAGGGCAAATACCCGAGGTTTACGCGTGTCCCGTGCCTGAAGCATGCCTTGGAGGCGTGGATTCGAGGTGTTCCCATGGTTACGAAGGTGCTCTCTGTGCTGCATGCAGCGTGGGATATTACCAACTTCTGAACAATTGTCGCAAGTGTCCTAAGACTCTTTGGTTTGTTTTACAGGTCTGTGGAATCGTAATCGTTATTGGTTTTCTCAGCGTGAGTCTCGTTCTTGCCAGAAAAAAGAAATGCAATCCGAACAGGACTGTAAGCGACATGGTACTTGCCCGGCTGAAAATCCTGATCGGCTTTTATCAGGCCACTTCCGGTACCTTGAACGCCTTTTCGTATGTTGCTTGGCCAAATGCTCTATTGACCGTTGTGCAATATGCAAATGTGGTACAGCTCAATCTCTTGCAGATCATTCCATTGCAGTGCTTTGTTGATACTTTTACCTTAAACGCCTATACCAGGTTTTTGATCGCCGTGGGAACAAACTCCACAGTCCTCTTCTTAGCAGTATCGATTTATCGTTTAAGGAAACGCTTCATGTTAAGGAATACTGCCCTTAGCGAAGCCCAATTGGCAGAATCCATTGCATGTATCAAAACGCAGACATATCGCATCGTGTGCCTTGTGCTCTTCATTACATATCCCTGGACATGCGACGCTGTTTTCCAGCTTCTACCGGCCACCTGTCAACCGATTTGCTCCAGTGGCAACAGTGATTCTTGCCAGTTCTTCTTACGCGCTGACGTCACCGTCCAGTGCTTTACCGATAAGTACAACAAATACACGATAGCAGTGTACCTTATGCTCGCCGTGGTGGCTGCTGTGCCGGGAATCATTTTCCTTCTGCTTTGGAAATACCACCACAGGAGAGTCTACATAGAATCGGAAGCTCAGAGTTACATTGGAAGGGAGGTTTCTCAAGGTTTAAGCTTCCTTCACGAGAACTACGCTCCAAACTGCTGGTTCTGGGAAATTATCGAACTGCTGAGAAAGGTGTGGCTGACGTCAGCGCTTTTCTTGATGGGAGCAGAAACGAGAAGCCATCTGGGAGCCGCAGCCATCGCATCCGGGACCTACTGCATTCTTGTTGCTTATTATAAGCCAATCAGAGACAAATTCGAGCACTGGTTGCAGTTGACATCACTGTTAGCGATCTTTGTGACTATGAATATTGGAATTCTGTTGAAGATACCAACGGAAGAAGTATATTCCCATGATGCAGCCGGAAGGGATTCCACCTTCCTGACTGTTACTCTAGTGGCGGTCAATGTCACTGTTATTGGAATAATCATCGTTCAGTACATCGCGACATTAGTCACTGCCTTGAAACGCCTGAGAAGCAACCCACAGTGTGGACCCGAATGCTGTATAACATTCTTGACGCAGATGATGGGAGCTGGGGGTGACGCCACGAGTATTGACAACACAGGAGAGATTCCAAACTCAATGGAGTTGCGACCTACATCCGTTACCAAGTGA

Transcript

aflo_s0022.g90.t3

CTTGCATCGAAAGGGTCATAATGTCTTATATTTGTGAACATCTCGGTTTCAATTGCTCTACAATTGCAGTAGCAAAGGGGCCTGCTAAAGAATGCAGATGTGAAAGACATGAAAGTAGCGGCAAAGTATATCTCAGAGTGAACTGTTCAAGTTTACAAATGACTCAGATTCCCAATGGTGACCTGCCTGCAACCACAAAACTTCTTGATCTGAGCAGTAACAAGTTACAGAGGATTGAGGGCGCAAATTTTACTGGCCTCCGATTTATTACGGTGTTGGACTTTTCACACAACTACATTTCGAAAATACCTTCAAAGGATATTTCGCGGAAACCTAAACTTGAAATTCTGAAGTTGGGACATAACAACATCTCCGAGGTGACGTTTGGTGCACTTCCCTCTGTTCCTGAGCTCTCATTCTTTGAACCTGCCAGGAAAGTTGTCAACTATGAACTTGCTCTGCCACGCAATATTGAGATTGTCATGTCTTCATCAGGATTCCAATGCACTTACCATGGCAACAACGCCAACACCTGTCGCCCTTGTCCTCTTGGGACATATCAAGTAAACGGAGAATGTATTCCATGTCCAGCAGGTGGCGTGTATCAAGACGAGGTAGGGTACACAGGCAGATCCTCTCATGGCATTGGATGTAAGTCATGCCCGGTGGGACACTATGTGCCACCCACAGCTGCTCCAGGCAAGGCCGTTAGAGAATGTGTTTTGTGTCCACAAGGTACCGATTACTCGCGATACGCCGGTTTCAAAGGTTGCGAGTGCCTTCCGAACTTTTATCGATTGGATCGATTCGGTGGTTGCACACAATGTCCTTTACGAGGCTTGTCGTGTCAAAATGAATCCATCAAACTTCAGCCTGGCTTCTACTGGAAATGGCCGTCAAATAAGAGTCTTGAACTGTACCAGAAGTTTTCTCGGGATCTCATGATCACCGACACTTCATACCGAAGTGAGCGATTTAAAGGGCAAATACCCGAGGTTTACGCGTGTCCCGTGCCTGAAGCATGCCTTGGAGGCGTGGATTCGAGGTGTTCCCATGGTTACGAAGGTGCTCTCTGTGCTGCATGCAGCGTGGGATATTACCAACTTCTGAACAATTGTCGCAAGTGTCCTAAGACTCTTTGGTTTGTTTTACAGGTCTGTGGAATCGTAATCGTTATTGGTTTTCTCAGCGTGAGTCTCGTTCTTGCCAGAAAAAAGAAATGCAATCCGAACAGGACTGTAAGCGACATGGTACTTGCCCGGCTGAAAATCCTGATCGGCTTTTATCAGGCCACTTCCGGTACCTTGAACGCCTTTTCGTATGTTGCTTGGCCAAATGCTCTATTGACCGTTGTGCAATATGCAAATGTGGTACAGCTCAATCTCTTGCAGATCATTCCATTGCAGTGCTTTGTTGATACTTTTACCTTAAACGCCTATACCAGGTTTTTGATCGCCGTGGGAACAAACTCCACAGTCCTCTTCTTAGCAGTATCGATTTATCGTTTAAGGAAACGCTTCATGTTAAGGAATACTGCCCTTAGCGAAGCCCAATTGGCAGAATCCATTGCATGTATCAAAACGCAGACATATCGCATCGTGTGCCTTGTGCTCTTCATTACATATCCCTGGACATGCGACGCTGTTTTCCAGCTTCTACCGGCCACCTGTCAACCGATTTGCTCCAGTGGCAACAGTGATTCTTGCCAGTTCTTCTTACGCGCTGACGTCACCGTCCAGTGCTTTACCGATAAGTACAACAAATACACGATAGCAGTGTACCTTATGCTCGCCGTGGTGGCTGCTGTGCCGGGAATCATTTTCCTTCTGCTTTGGAAATACCACCACAGGAGAGTCTACATAGAATCGGAAGCTCAGAGTTACATTGGAAGGGAGGTTTCTCAAGGTTTAAGCTTCCTTCACGAGAACTACGCTCCAAACTGCTGGTTCTGGGAAATTATCGAACTGCTGAGAAAGGTGTGGCTGACGTCAGCGCTTTTCTTGATGGGAGCAGAAACGAGAAGCCATCTGGGAGCCGCAGCCATCGCATCCGGGACCTACTGCATTCTTGTTGCTTATTATAAGCCAATCAGAGACAAATTCGAGCACTGGTTGCAGTTGACATCACTGTTAGCGATCTTTGTGACTATGAATATTGGAATTCTGTTGAAGATACCAACGGAAGAAGTATATTCCCATGATGCAGCCGGAAGGGATTCCACCTTCCTGACTGTTACTCTAGTGGCGGTCAATGTCACTGTTATTGGAATAATCATCGTTCAGTACATCGCGACATTAGTCACTGCCTTGAAACGCCTGAGAAGCAACCCACAGTGTGGACCCGAATGCTGTATAACATTCTTGACGCAGATGATGGGAGCTGGGGGTGACGCCACGAGTATTGACAACACAGGAGAGATTCCAAACTCAATGGAGTTGCGACCTACATCCGTTACCAAGTGAGATGCCCCACGCCGAAAGAAAAACAGAACATAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07699	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011641	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11319	G PROTEIN-COUPLED RECEPTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan