Detailed information of aflo_s0029.g27.t1 in Acropora florida

Genomic Location: sc0000029_pilon:466224...508924
NR annotation: XP_029194123.2, stimulated by retinoic acid gene 6 protein-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95M17Acidic mammalian chitinase OS=Bos taurus OX=9913 GN=CHIA PE=1 SV=1
Q9BZP6Acidic mammalian chitinase OS=Homo sapiens OX=9606 GN=CHIA PE=1 SV=1
Q6RY07Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17172GST_N_4Glutathione S-transferase N-terminal domain DomainInterproscan
PF14752RBP_receptorRetinol binding protein receptorFamilyInterproscan
PF00704Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011583DomainChitinase IIInterproscan
IPR029070Homologous_superfamilyChitinase insertion domain superfamilyInterproscan
IPR012336DomainThioredoxin-like foldInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001579Active_siteGlycosyl hydrolases family 18 (GH18) active siteInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR050314FamilyGlycosyl Hydrolase Family 18Interproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR026612FamilyReceptor for retinol uptake STRA6-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11177CHITINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0004568Molecular Functionchitinase activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0006032Biological Processchitin catabolic processInterproscan
GO:0034632Molecular Functionretinol transmembrane transporter activityInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01183E3.2.1.14; chitinaseEC:3.2.1.14
Amino sugar and nucleotide sugar metabolismko00520deepkoala

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