Detailed information of aflo_s0035.g26.t1 in Acropora florida

Genomic Location: sc0000035_pilon:349666...398820
NR annotation: XP_044165089.1, nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35206Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15a1 PE=1 SV=2
P39059Collagen alpha-1(XV) chain OS=Homo sapiens OX=9606 GN=COL15A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06482EndostatinCollagenase NC10 and EndostatinDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR010515DomainCollagenase NC10/endostatinInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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