Detailed information of aflo_s0040.g102.t1 in Acropora florida

Genomic Location: sc0000040_pilon:1493785...1510393
NR annotation: XP_029198920.1, probable ATP-dependent RNA helicase DDX56 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3SZ40Probable ATP-dependent RNA helicase DDX56 OS=Bos taurus OX=9913 GN=DDX56 PE=2 SV=1
Q9NY93Probable ATP-dependent RNA helicase DDX56 OS=Homo sapiens OX=9606 GN=DDX56 PE=1 SV=1
Q9D0R4Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14810DDX56, DBP9; ATP-dependent RNA helicase DDX56/DBP9EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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