Detailed information of aflo_s0040.g55.t2 in Acropora florida

Genomic Location: sc0000040_pilon:869984...896115
NR annotation: XP_029200069.1, endoribonuclease ZC3H12A-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5D1E8Endoribonuclease ZC3H12A OS=Homo sapiens OX=9606 GN=ZC3H12A PE=1 SV=1
Q5D1E7Endoribonuclease ZC3H12A OS=Mus musculus OX=10090 GN=Zc3h12a PE=1 SV=2
A0JPN4Endoribonuclease ZC3H12A OS=Rattus norvegicus OX=10116 GN=Zc3h12a PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|RAWUL

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF11977RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan
PF16207RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan
PF18039UBA_6UBA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051101FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR021869DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR032443DomainRAWUL domainInterproscan
IPR040546DomainRege-1, UBA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12876N4BP1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan

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