Detailed information of aflo_s0045.g20.t1 in Acropora florida

Genomic Location: sc0000045_pilon:540835...553401
NR annotation: XP_029212333.1, tubulin beta chain-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P41937Tubulin beta-4 chain OS=Caenorhabditis elegans OX=6239 GN=tbb-4 PE=3 SV=1
Q9YHC3Tubulin beta-1 chain OS=Gadus morhua OX=8049 PE=2 SV=1
P36221Tubulin beta-1 chain OS=Notothenia neglecta OX=202063 GN=tubb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002453FamilyBeta tubulinInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR000217FamilyTubulinInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07375TUBB; tubulin beta-Exosomeko04147deepkoala

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