Detailed information of aflo_s0054.g29.t1 in Acropora florida

Genomic Location: sc0000054_pilon:371526...416296
NR annotation: XP_044166133.1, H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VJ62H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Drosophila melanogaster OX=7227 GN=CG10341 PE=1 SV=2
O14360H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=naf1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04410Gar1Gar1/Naf1 RNA binding regionDomainInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF13176TPR_7Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR038664Homologous_superfamilyH/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR007504FamilyH/ACA ribonucleoprotein complex, subunit Gar1/Naf1Interproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR052386FamilyG-protein-signaling modulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45954LD33695PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

TOP