Gene detail

Detailed information of aflo_s0058.g66.t1 in Acropora florida

Genomic Location: sc0000058_pilon:1199467...1219980
NR annotation: XP_015763786.1, PREDICTED: uncharacterized protein LOC107342794 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P19172	Acidic endochitinase OS=Arabidopsis thaliana OX=3702 GN=CHIB1 PE=2 SV=2
P51614	Acidic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT3 PE=2 SV=1
P23472	Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF00060	Lig_chan	Ligand-gated ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013099	Domain	Potassium channel domain	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR001579	Active_site	Glycosyl hydrolases family 18 (GH18) active site	Interproscan
IPR050542	Family	Glycosyl Hydrolase 18 Family Chitinases	Interproscan
IPR001320	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45708	ENDOCHITINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004568	Molecular Function	chitinase activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0015276	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan