Detailed information of aflo_s0064.g9.t1 in Acropora florida

Genomic Location: sc0000064_pilon:174776...180312
NR annotation: XP_044172183.1, uncharacterized protein LOC114963231 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PDZ2TATA box-binding protein-associated factor RNA polymerase I subunit C OS=Mus musculus OX=10090 GN=Taf1c PE=1 SV=1
Q6P773TATA box-binding protein-associated factor, RNA polymerase I, subunit C OS=Rattus norvegicus OX=10116 GN=Taf1c PE=2 SV=1
Q15572TATA box-binding protein-associated factor RNA polymerase I subunit C OS=Homo sapiens OX=9606 GN=TAF1C PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20642TAF1C_HBTAF1C, helical bundle domainDomainInterproscan
PF20641TAF1C_beta-propTAF1C, beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049090DomainTAF1C, helical bundle domainInterproscan
IPR049087DomainTAF1C, beta-propeller domainInterproscan
IPR038801FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650Cellular Componentfibrillar centerInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15214TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C-Transcription machineryko03021deepkoala

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