Detailed information of aflo_s0073.g19.t3 in Acropora florida

Genomic Location: sc0000073_pilon:225006...268602
NR annotation: XP_044163077.1, lysosomal-trafficking regulator-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9TTK4Lysosomal-trafficking regulator OS=Bos taurus OX=9913 GN=LYST PE=1 SV=1
P97412Lysosomal-trafficking regulator OS=Mus musculus OX=10090 GN=Lyst PE=1 SV=1
Q99698Lysosomal-trafficking regulator OS=Homo sapiens OX=9606 GN=LYST PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000409DomainBEACH domainInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR050865FamilyBEACH Domain-ContainingInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22937LYST, CHS1; lysosomal-trafficking regulator-Membrane traffickingko04131deepkoala

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