Detailed information of aflo_s0073.g33.t2 in Acropora florida

Genomic Location: sc0000073_pilon:358027...371565
NR annotation: XP_029191184.2, uncharacterized protein LOC114957815 isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|F-box
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR053299FamilyASTRA complex-associated WD repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001810DomainF-box domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44156SUPERNUMERARY LIMBS, ISOFORM B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0061136Biological Processregulation of proteasomal protein catabolic processInterproscan
GO:1990756Molecular Functionubiquitin-like ligase-substrate adaptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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