Gene detail

Detailed information of aflo_s0078.g21.t1 in Acropora florida

Genomic Location: sc0000078_pilon:321689...326855
NR annotation: XP_044169067.1, uncharacterized protein LOC114965885 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0078.g21.t1

ATGGATCGGGAAATTGTGAGACCCTTTCAGCAACTCTTAGAAACTGATGACCATGAACACATGGTGATTATGCACCTCAGCTATCTATTGAAACAAGCTGAGGAAAATGAATGTCATCAGTATGTTTGTCCTGGCTTGCAGTGCTTAGTTTTGGGTGATTCTAAAGTTGGAAAAACCAGCTTAGTCACATCACTTACTGGGGAACGATTTGATACCGAGCAAACCAAGACACAGGGAATAGAAGAACGAATCGTTGACAATGATTGGAGTACCCTGAAATTCACAAAGGGTCATGTCCCGGGAAACTTAATTCCGTACTTTAAAGAAGCCCTTTTTCGGTCAATGTCTTTTGCTCAATGTGCACTACTTGCTAAAGTTGTTGAAGTAGATTGGACCTGGAAGGCACTCATTGTGTTTATGGCTATCATCTCTTCCATTGGTGTGATACCCTCACTGACAACAAAATGTTGTATTTTATTTTTCTGTAGCATTGTTTTCCTTGTGTGGCATCTCATGTATCTGTACAAGATAAGCCCTGTGGCAGCTGATATAAGATGCAGTGTTGTGCAGCTTATGAATGCCTCCTTTGATGCTCCCTTGTATACTTCCCTCTTCTACTTGGCAAGATTAAAACTTAAAGCGTACAGAAGGGGCAAGTTTTTGAACTTAAAGTTGCTGGATTTTGTTGGTGATAGGGAATATTATTCATATCACCATCTGTTTTTTAGACCTGAAGCGTTACACATCATTGTCTTTAACTTGTCAGAGTTTGCCAATGAGTATTTCAGGGGTGTGTGTACACAAATTCAGAGACTTCAATTCTGGATGAAATCCATTTGTAGCCGCGTACCTCTGAGTGACTACACTCAAATCGTGCTTGTTGGTACACACAGAGAAAACCTGAATGACAACTGCATAAAGATACTCAATGACCACCTAAAAAGATTCCTATCAGAGAAGTACTGTGGTAAAGTGATGGAAAATGATGTTGACAGGTTGGTTTTTTTTCCTGTGGAGAACACATTAAGGAACAAGGACACTGGAATAAAAGAACTTCAAAGCAAGATCATGTGTATAGCTAGTGAACAGCAAAAAAGAATCATAATTGAACACAACATCCCTCTGCAATGGATTCTGATCCAAGATGTAATTATGAAACACAAAATAAGCTCAGATGCTAAGTTTTGTGTTTCACTCGATGAGTTTCAAAGGATGATAAGGGAGGACTTTGTTCTTCTTGATAAATGTTGTTTGTCCAAAGATATGCTGAAGTACTTTCACAAGATTGGACTGATAATTTATGTTGACAAGAAGCAAGATTTTGATTTGTCAAAGTGGATTCTTGTTTGTCCAGAGAAACTGATTGACGTTTTCATCAACATCTTTTCAAAACCAGTAGAAAGTACCAAGTACAGGGGATCATTAAAGTATGATTGGAACCTCTTGCAAAGGAAAGGAATGTTGACCAAAAAACTTTTGCAGTCTCTCCTGTCCAAATTGGAGAAAGAGGAAGAAGCCATTATTGCATTCCTTGAGCATTATGGCCTGATCTGTCCCCTGGAATACAAAGGAATCGCAGGAAGCGCAAATTGTGACTGTGACATTCAGCCAACGCACTTTGTTCCCTCCTTATTGCCTTTGAGTGCAAATGGTGATACCCCAGTGTGGCACAACAGTGATGGAGATAAAAAGTTCTATGTGTTTTTCTGCAACTTCCTTCCTGAAGCTTTCTTTCATCAGCTGCTCTCTCGTGCACGAAAGAACAGTGCCCTTGAATTTCCAAATGGCAAAACTGTTTTATACAGAGATGCTGGCAAGTTTTGGATGAACCCTTGGCTGAGTTACCAGCTTGCATTGATTGAGGAGGAGGAAATGATAGAAGTAACATACAACAGCAGccacagaaacaaaaaggagccttctgatgtgctatgtcaggtgttttcgatgattgatggaatctgtaagagttattttccttttgtcaagttccactgtggtccatcctgcccctctgaaacatgtccaggtcatcaagatgactactttacttcacttccagctgaagaaggcaatgggacaagacgtcgccatgtttacaatataatgccaggacgtcaaggaaacagggctgcctatttatattgtcaaaacaactgtcttgaagatgagttgtgtgaatggattccttag

Transcript

aflo_s0078.g21.t1

TAATTCACCTTGTCATTGCTTGTATGCGATGTAGACGATGGATCGGGAAATTGTGAGACCCTTTCAGCAACTCTTAGAAACTGATGACCATGAACACATGGTGATTATGCACCTCAGCTATCTATTGAAACAAGCTGAGGAAAATGAATGTCATCAGTATGTTTGTCCTGGCTTGCAGTGCTTAGTTTTGGGTGATTCTAAAGTTGGAAAAACCAGCTTAGTCACATCACTTACTGGGGAACGATTTGATACCGAGCAAACCAAGACACAGGGAATAGAAGAACGAATCGTTGACAATGATTGGAGTACCCTGAAATTCACAAAGGGTCATGTCCCGGGAAACTTAATTCCGTACTTTAAAGAAGCCCTTTTTCGGTCAATGTCTTTTGCTCAATGTGCACTACTTGCTAAAGTTGTTGAAGTAGATTGGACCTGGAAGGCACTCATTGTGTTTATGGCTATCATCTCTTCCATTGGTGTGATACCCTCACTGACAACAAAATGTTGTATTTTATTTTTCTGTAGCATTGTTTTCCTTGTGTGGCATCTCATGTATCTGTACAAGATAAGCCCTGTGGCAGCTGATATAAGATGCAGTGTTGTGCAGCTTATGAATGCCTCCTTTGATGCTCCCTTGTATACTTCCCTCTTCTACTTGGCAAGATTAAAACTTAAAGCGTACAGAAGGGGCAAGTTTTTGAACTTAAAGTTGCTGGATTTTGTTGGTGATAGGGAATATTATTCATATCACCATCTGTTTTTTAGACCTGAAGCGTTACACATCATTGTCTTTAACTTGTCAGAGTTTGCCAATGAGTATTTCAGGGGTGTGTGTACACAAATTCAGAGACTTCAATTCTGGATGAAATCCATTTGTAGCCGCGTACCTCTGAGTGACTACACTCAAATCGTGCTTGTTGGTACACACAGAGAAAACCTGAATGACAACTGCATAAAGATACTCAATGACCACCTAAAAAGATTCCTATCAGAGAAGTACTGTGGTAAAGTGATGGAAAATGATGTTGACAGGTTGGTTTTTTTTCCTGTGGAGAACACATTAAGGAACAAGGACACTGGAATAAAAGAACTTCAAAGCAAGATCATGTGTATAGCTAGTGAACAGCAAAAAAGAATCATAATTGAACACAACATCCCTCTGCAATGGATTCTGATCCAAGATGTAATTATGAAACACAAAATAAGCTCAGATGCTAAGTTTTGTGTTTCACTCGATGAGTTTCAAAGGATGATAAGGGAGGACTTTGTTCTTCTTGATAAATGTTGTTTGTCCAAAGATATGCTGAAGTACTTTCACAAGATTGGACTGATAATTTATGTTGACAAGAAGCAAGATTTTGATTTGTCAAAGTGGATTCTTGTTTGTCCAGAGAAACTGATTGACGTTTTCATCAACATCTTTTCAAAACCAGTAGAAAGTACCAAGTACAGGGGATCATTAAAGTATGATTGGAACCTCTTGCAAAGGAAAGGAATGTTGACCAAAAAACTTTTGCAGTCTCTCCTGTCCAAATTGGAGAAAGAGGAAGAAGCCATTATTGCATTCCTTGAGCATTATGGCCTGATCTGTCCCCTGGAATACAAAGGAATCGCAGGAAGCGCAAATTGTGACTGTGACATTCAGCCAACGCACTTTGTTCCCTCCTTATTGCCTTTGAGTGCAAATGGTGATACCCCAGTGTGGCACAACAGTGATGGAGATAAAAAGTTCTATGTGTTTTTCTGCAACTTCCTTCCTGAAGCTTTCTTTCATCAGCTGCTCTCTCGTGCACGAAAGAACAGTGCCCTTGAATTTCCAAATGGCAAAACTGTTTTATACAGAGATGCTGGCAAGTTTTGGATGAACCCTTGGCTGAGTTACCAGCTTGCATTGATTGAGGAGGAGGAAATGATAGAAGTAACATACAACAGCAGccacagaaacaaaaaggagccttctgatgtgctatgtcaggtgttttcgatgattgatggaatctgtaagagttattttccttttgtcaagttccactgtggtccatcctgcccctctgaaacatgtccaggtcatcaagatgactactttacttcacttccagctgaagaaggcaatgggacaagacgtcgccatgtttacaatataatgccaggacgtcaaggaaacagggctgcctatttatattgtcaaaacaactgtcttgaagatgagttgtgtgaatggattccttagaaaGAGGATAATGTAAATGAACTTCATAACTGATGTATTGATAGCTGTAAGCTGTCAACTAACGAGTTGGTTCACAGTTAAGAATTTATTATTATTGGTACCAAAAAAAAAATTGTTAGAGAGAAATTAGCATAAGCTGACACAAGTCCAATCAGGGGTAGTTAAAATGAATTTTGAATGGACATGTGCAGACAGATTTGGTGCTCTGGCAGTGGATGAGATTGTCTTTTATTGACAACATTATAATTGTCTCTCATGGGAGCAAGGGTAGTTAGGGTTAGGGTTTAATTAGGGTTAAAGTTTaagtgctgctatgatcaaattcatatccctatcatttttaggtttatcatgtagaactccaggaaagaataaaaacgctgttatttgtattagttctggagatagttaagtttgaaaagtgtataaaatatgcaaataaggggcttatgacgtcatttgtaaaacctaatgtaacatcaagtatataaatagacctatcttgatcaatttttagcagagaccattgaaatgtggtagggtaatagttctacaggcaacacacttactgctataaaaaatatggttccca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR020859	Domain	Roc domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan