Gene detail

Detailed information of aflo_s0080.g18.t1 in Acropora florida

Genomic Location: sc0000080_pilon:326606...341874
NR annotation: XP_029195873.2, EF-hand calcium-binding domain-containing protein 7-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0080.g18.t1

AGTCACAGCTGCGGTTACAAGATTTGGCTGCCAAAAATGTAGAATTACAAGAGGAAGGATCCTACTCAAGCCATGTCCGAAACAAAGCGAGTCAAACCTTTAAGAAGGTCCTCAAATTCAAGCTTGTCTTCTCGAGCTTCAAACGTGTCTTTCTCCGAGAAGGTTCGACGTGAATCCACCGCAAAATTTGACGACTTTATGAAGGAATGCCGCGCTGCCTACTTGGCAGTCTTGAGCAGTACAACTGAGAAAATCACATCTATTGACGAACTAATTCTAGCCCTTCAGTTTGGTGGAAGAAACCCATCCAAGAAGGTTGTTCAGAAATATTGGAAACATGAAACAGACAGCATCTCATACAATGATTTTTGTGACATTATGAGAAAGGAAAAACCGCCTAATGAGGATTCTCTGCTTAAAGCATTCAAATGTATTGATAAAAATGGTGATGGATATATAACATCTGATGAACTGTTCAATCTGTTGACCAAGCAAGGAGAAAGAATGACTAAGTCTGAGGTGCAAGCAATTCTAGATGATGCTGATACAAACAATGATGGAAAGCTAGATTACATTGAGTTTACAGCCATGCTACTGGCCACGTCAGAAGACTGCAAGCAGAAGAGCTTAAAAAGGCTCGCGCAAGATGATGATAACGTTGTGATATCAGCGAGAAATTCATCTTTCAATAAGAGAGCTATTCTCAGTACTCAACGCTCCCACAAACCTGATAATTTAAAGGACTGGAGTAGAGTCTTTAGCAAAGGAAGTTTCTTCATTAGCATGGATGGTGTCATCTCCAGTCACAAATACAAACTGCAGATTCCTAGGGATTCTGAGGTCTTTATAACGATTCACCAGATGGCAAAATCAAAAGTTGTAGATCACTTGCACAAAACTGACATGGCAGTTTTTTGTTTGAATGAGCAGTCTGAACTGATTGCTTTTACGGAATCCACAGTTGAACAGGAATTTTGCCTTCGTTGTGAGCTCAGCAGAGGATCTTATAGTTTAATCACGTTCACAACTGGCTGTCATTTGACTGTCCGCAATTCTCAGCCTCTGAAGAAAGCAAACCTCACTGTGGGTTCAGGAGAAAACTTGCAGTTAAGCAAGGTGTTTAGGGAAACTCTGGTTGATGTGTTTGAGCGCAGTGATCTTGATGACAACGGATATTTGAGTCGGGACGAATTTGACTTGTTTCAGTTGAAATCAGGCGGTGATCTTTGCGACGATGAAGCTTGGCAGGTCATGAAGGAGAATTTTGAGATGAAAGATGGCGAAATCACTCTGGAAGGATTTCTGGAACTGAACACAATGGAAGCTCAGGATGCTGATGGTGACCCCAATGACTTATGGGTAACGTTGGAGAGCATGGGCTACAACAAAGCCCTAGAGCTGGACCAGGATCTTATTTTGTTCCGCTATGAAAGTACTTCCAGGGTCACGCTGGTGCTGCAGAACTTGTCTCACAGCGAGGTGGACGTTAGAGTGGATTGTCGTTCAAGTAAGAACTGTTTAAGCCATCGAGGAGATCTGGATTACGTTATCAAGCTTGATTCCAATTGTACTGAGGTTGTTTATCACTTTGTTCCTCACGACGCACGGAGGGAATGGTCTGTAAAGCACGTCTTGACAATCGAAAAGTAAAATCTTAGAACTGAAGAGGGTCGCATTTGTGGTCACAAGAATTTTTCGTGTCCGTTACATGATATACCTTCAAGCATGCCTTGACGGTTTTGCCGCTGGGTACAATGCATTTGGGCTCAACATAAGCGAGTGGCTGGTTTTGGTGCTATGTCAACCTGACTGTAAATCGTCTACAGAGTGAATATCTGACAAATTCAAAGAGAGCCGAAAGCTGACAGCTTCAAAGGGCATCAGTGGAGGCAACGCTTAACACAGCTAACGTTTTTCTGGAATCTGAGCGACCTTTCATCACTTGTACGTATATGAAAATTGATCGCTGTAAACGTGTGTCTGCATCGTCTAAAGCGCTTGCCGTCTGCCCAAAACTTAAAGTATTTATTTTAGTTTTAGCGACGGGATCTCCTAGTGTAAATCGTTGGAAAATAAATATATAATATTTAT

Protein

Uniprot

Uniprot term	Description
A8K855	EF-hand calcium-binding domain-containing protein 7 OS=Homo sapiens OX=9606 GN=EFCAB7 PE=1 SV=1
Q6DCF6	EF-hand calcium-binding domain-containing protein 7 OS=Xenopus laevis OX=8355 GN=efcab7 PE=2 SV=1
Q8VDY4	EF-hand calcium-binding domain-containing protein 7 OS=Mus musculus OX=10090 GN=Efcab7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08356	EF_assoc_2	EF hand associated	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR013567	Domain	EF hand associated, type-2	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR052266	Family	Mitochondrial Rho GTPase/EF-hand domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46819	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0060170	Cellular Component	ciliary membrane	Interproscan
GO:0098797	Cellular Component	plasma membrane protein complex	Interproscan
GO:1903569	Biological Process	positive regulation of protein localization to ciliary membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23852	EFCAB7; EF-hand calcium-binding domain-containing protein 7	-	Cilium and associated proteins	ko03037	deepkoala