Gene detail

Detailed information of aflo_s0099.g55.t2 in Acropora florida

Genomic Location: sc0000099_pilon:850437...880867
NR annotation: XP_044176924.1, G-protein-signaling modulator 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0099.g55.t2

ATAAACAGTTGAAGTGAGCCAAACTACGCATCGAGAAACGGGATCGATGCAGAACTTTTTCCAGGCGTTAGGACATTCACAAGTGGCGATGCTATAGCATTAGTCCCCGGCGAGTCAATGCGCAACAAGGAGTCACGACTGTTGCTCCGCTGAAAACCTGAAAGTTTAACTGAGTACCAGACAACGATCGATCCTTCTCTAGCCGTACACGATAGCTAACAAAAGCGTACTTGACAACAACGCTATCGGTAAGGAATCTCTGTTTGTGTCGCCTTGAGAAGGATAAAAAAAATGGCCGGGCAAGCTTCTTGCATGGAGCTTGCGCTTGAAGGAGAGAGACTGTGTAAGGCCGGCGATTGCAGAGCAGGGGTCAGCTTCTTCGAAGCGGCCGTACAAGTCGGGACAGAGGACTTGAAAACATTGAGCGCTGTCTACAGCCAATTAGGGAACGCGTACTTTTATCTTCAAGAATACGAGAAGGCTTTGGAATTTCATCGACACGACTTAACCCTAGCCAGAACTCTAGGAGATAGAGTCGGCGAGGCCAAAGCCAGCGGAAATCTTGGGAACACGCTGAAAGTTTTGGGAAAGTTTGACGAAGCTATAGTCTGTTGTACCAGGCATCTCGATATCTCGCGTGAGCTCGGAGACAAGATTGGCGAGGCTAGGGCTTTGTATAATCTGGGAAATGTATATCATGCCAAAGGAAAGCATTTTGGACGTAATTTTCATCAGGATCCTGGGGAGTTTCCAGTGGAAGTACGCTCCGCTCTTGAAAGAGCAATCGAATTTTATGAAGCAAATCTTGCAATTGTAAAGGATCTTGGAGATAGAGCTGCACAGGGAAGAGCTTGCGGCAATCTGGGCAACACTCATTACCTTTTAGGAAATTTTGAACTGGCCATTATGTTCCATGAAGAGAGGCTGGCCATTGCTGAAGAATTTAATGACAAGCCGGCAGAAAGACGAGCCTGTAGCAATCTTGGCAATGCCCACGTTTTCCTGGGAGAGTTTGAGAATGCAGCTGATTATTACAAGAGAACACTTACCATATCTCGTGAACTAGGAGACAAGGCTATCGAAGCACAGGCATGCTACAGCCTGGGAAACACGTACACTCTATTGAGAGATTATGAACATGCCGTGGATTTTCACAATAAACACTTAGTTATTGCACAAGAGCTTGGAGACAGGGTCGGCGAAGGCCGTGCTTGCTGGAGTCTGGGAAACGCACACACCGCTCTAGGAAATCATGAAACGGCGTTAGATTTTGCCCAGAAGCACTTGGAGATTTCTAAAGAGGTTGGCGATCGTACAGGACAGATCACCGCAGAAATGAATATCTCAGATTTGAAAGCTCTAGTGGGAGGAGAAAACGACTCAAGAGAATTTGCTTCTGCTGAAAATGTGCATCGAAGCAGCCCGGGATCCATAAAACAACTATTTAACCGCAAATTCAGCCACGGAGAAGCAGATAGGAAAAAGGGCGAGGCGGCTGCATCAGCAAATGGAAACAACAAACCGCGCACTTCCTCTGTGTCCTTACGAAAACCACTGGACCATGGCGATGTACAAGTACGAGTGAGCAGCCCGGAGACTGATAATGGGTTAGACGACTTCTTTGAGTTCTTGACCCGTTGCCAAGGGAACAGAATGGACGAGCAGCGATGTGAGCTGCCCGAGCCGGCGACTTCTAAAAGTGGAAGCACGGAAGACATGTTGGATATGGTGGAGCGGGTGCAAGGTGCCAGAATGGAAGAGCAACGCAGTGATTTGCCTGCAGATGAGAATGGATCTGTCACAAGAAAAGTGGGAAGGAGAGGAGCAAACGGCGCTGGGGATGATCTTTATGAAATGGTTCTTCGAAGTCAATCCCAACGTATCGAAGATCAGCGCTCTGAAGCTCCATCTGCCCCCACGGTACCTGACGAGGACTTCTTTGGTCTCATCCTTCGCCTACAGTCCAACAGAATGGACGACCAGCGGTCTTCCGGGCCCGGTGGACACAAGCATCAATTGCAAGCAAGGCGATAGCTTCACTATTTTAATATGAAAAGTTCACTTCGACCATTGCCTGTTAGTAGAAGCTTCAGACTCAAGCCCGTGATTTCCGGTAATGGTACAAGGAGTGAAGAGTGCTTTAGTAAGCGTCCAAGAAAAATGTCATCCtttttttttcttctctttttgtttgttttttACTTACTACTAAAGGTGTACTTTTCGCTTCTTCCGATGGCTTCCGTCACGCAGGTCGCTTCAGTTCCTTTTGGGAATTACGTTGTTGCGTGACGGATTAACGTGGGACAAAATTAGTGTTATCTGGAAATGAAAAGTTAGGGAAAGTGAAACTCGAAGATTCGGTCGcaaacgagtttataaaggtcaaattatcaccgtagaaagattACGGAGGTAATACGATTATTTTCAACTTATTTGACTCCACTTGGGATGCTAATTGTTTTGGGATAATTTTTAGAAGACTGTACTTCAAATGTCTTCGGCTTTGTAAGTGTTTTCTGAAGAGATCAGTCTGGAAATGTGTGTTTTATTAACACTTCGGTGTGGCGACAAAAAGTGTATAAACAGCAAGGATAAAGTAGTGATACTTTTTTTAAAAAAAAAGATAAAATTGACAAATTCAGGTCACATGATCAAatgtatttaacataccgtaaaattccgaaaataagcccctctatgcattagcccctccaagtatatgctcccccacaattcgtagcgcaaaaaaccttccgttaaatcgcccctccgaatgtaagccgccggaggcttatacttggaaattgcccccaaatacaaaataaaacaaagtgaaaacgatacggtaactgatattttttttatattttgccttctaactataagctaactcggttttgaaacgcaaattttccacagtgtataagcccctccgaatatacgcccctcaaaaaaaaagcccctctaaaaggaccattgaaaaatgtaagcccttgggcttattctcggaattttacTGGATCAAACTTCTGGAGAACAGTTATTTTTTAAAGAAAGGCGACTGCCCATCCGGCTCTTTTTAGAGTTGTCGGTGTGATTTTAATGTTCTATTTTTGGTACAGAATAAAAAATGATGAACACC

Protein

Uniprot

Uniprot term	Description
P81274	G-protein-signaling modulator 2 OS=Homo sapiens OX=9606 GN=GPSM2 PE=1 SV=3
Q8VDU0	G-protein-signaling modulator 2 OS=Mus musculus OX=10090 GN=Gpsm2 PE=1 SV=2
Q6IR34	G-protein-signaling modulator 1 OS=Mus musculus OX=10090 GN=Gpsm1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF02188	GoLoco	GoLoco motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR003109	Conserved_site	GoLoco motif	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030695	Molecular Function	GTPase regulator activity	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala