Gene detail

Detailed information of aflo_s0113.g33.t1 in Acropora florida

Genomic Location: sc0000113_pilon:699595...710267
NR annotation: XP_029206892.2, uncharacterized protein LOC114970593 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0113.g33.t1

ATGATTTGGTGGATTTTCATAGCCTCGTGGTTTTCACATGGCTCTTCGCTGAACGTCTCAATTTCACAACAATCTGGTGAAAATAATGTTACTTGTTTTAACCCCAATGGGTCGTTGCCTTGTAAAACCATTAGTTACGCGCTTGGAATTTTAAGCAACGTTACGTTTGACCGAGAAACTACATTTGTATTTTCTCTTTTGGATGAGGTGTTGTTTCTGCATAGTCAAATTTCAATTTTCCAGCCACGAAAGATCAGGGAGATATATTTCACTTCTGCCCACGAATCGAAAAGGACTGTGGTACGATCCAGCTCGGAAAGCTCTGGATTTGTTTTGGGGAGAAAAGAAGCGAGGCGCTCTGTTTCGACATACAATATTCATGTTTCAAATATTGAATTTGAGCTGTTTAGTAAGAAATCGGCTGCCGTGGTCATGGTCTGGAGAGCGGACAATGTGTCATTTACAAATTGCGTATTTCGAAATAACAAACGATCTGGCATAAATGCCTTCGACAGCGGAGTCAAAATAATTAGATGTCTCTTTGTGAACAATTCCGCTAATTCCCAAGACGCGCCTGTCATGGTAGGTAATTCTTCTGTCGCTGGTGGAGCAGGTTTTGTGTTCTTTGAGCTAAGTGGACTAAGTGTTATAGTGAAAAATTCAAACTTTTCGCACAACGCAGCTGTGTATAACAACTCAGAAAATTTTATCGCTCCTCGTTCCCTCTCAGTGCTTCCTCGTCTAAATTTATTAGGTGGAGGCCTTTTGGTGGCATTTCTTAACGACTCAAAATCAAATACAGCCATTGTGGAAGACTCCGTTTTCGAGAAAAACCAAGCAACTTTTGGCGGAGGCTTGCTCCACTGTTCTTGTCACTCCTCATCGGGAAACTCACTGAAAGTTCAAAGATCTATTTTCGCCGGCAATCTGGCAGCGCAGGGTGGAGGTGGTCTGAGCACTTCTGTGTGGGATTTTGGCACAACGAATACACGCATTGAAAATTGCGTTATTCGAGACAACTGGTCAAGGAGAGGCGGTGGAATGAACGTTTTTATCATGAATTATTACTCGTCTGATCTTCAATCGCGGATTTCATTTGTCAATTTGACTTTGGATGGAAATAGAGGGCGCGCTAGCGCAGCAATTCGCCTTGACACGGCCCTGCCCATGAGCTCACCAGTTAATCTTAAACCCGAGTTTATTGACTGCACCATAAAGAACCATGGTGCGAACTATCGGACATACACAGCGCCGTTTACAAGTCAACGAGTTGACATCATGTTCAATGGCAGAAATGTTTTTACGCAGAATCATGGCGCAGGCGCAGTGGAGTATCATGCAGGAGTGATACATGTGGAGGGCAGTTTGAATTTTATTGGCAATTCCGGTTCTCAAGGAGGGGCGGTGTTTCTGAGGTCGAGTCAAATAACGTTGTATCCTGGCAGTGAACTTCGTTTTGAAAAGAACTTCGCCAATGGCAATGGTGGGGCAATTTTGGTGTGGACCCGAGAAATGTACGAGTTTATCCGACCAGATAATCCGGACTGTTTCGTGGTGTACAGCAAAGATAGAACCCCGCCGTCACAATGGAAGGCAAAGGTGTCTTTTATTGGAAACAGCGCCAAAGTTAAGGGCGCGGCCGTTTATATCTCGTCTCTCGATGCCTGTCTATGGTATGAAAAGTACCCGTTTTACAGCGTTGAGAAAGCGCTTCGGTGGAATAACACGTTTGTTTACAATGGAAACTTCATCCATCCGTCAAAAGACTTCAAGCCCTTATCAGGACCCGACTACGACATTGCTACAGACACTCATCACTTTAATGACGAAGATCACGATGATAAAAATATTAAGCTATCGCCTGGCGAGAGAATCATGCTCGATATAGAAGGCTATGACGAACTCAACCACTCTGTGTTTGCCCTTGCTGTTTTCTCACAGAGAGGCATTTCCGGTGGCAGTTCGCCACTTCATCTCAACAATGCGATGCGTCTGTTATCGCCGGTGGAGTCCGCCAAAGTTCCGTTTTCGTATCATGTGGCAAATGACACTTTGTATAATGAGGTGAAAAATGGCAGCGTTCACCGGTTTCAGTTGGAGGATGTGAGGTCTACGCTGAAAAACAGATATTTGTTCAACGTGACAGCGATACCGTGTAGACCTGGGTTCAAGTTTAAGAACACGCGATGTGTTTGTGACAAAAATATCGAAGGAGTCTTATGGTGCAGCAGCGATGGACGGACAGTCTATCTGCAAGAGGGGTACTGGGGCGGAAACATTGATGGTCGCCTAGTAACGTACTTTTGTCCTTCACACTATTGTCAGTGCGAGCGCAATGGAGACCTTCCTGGATGTGTGTTTAACGCGGGCCGAGAAGATGATCAATGCGCTCACAACCGCACTGGAGTGTTATGTGGCAAATGCATGAAGGGGTTGAGTGTTGGGTTAAGGTGGGAAGAATGCTTGCCGCGCGGGGATGGAGGAGCCTGGATAATAGCTGTCGTCGTGCTCCTTATCGTTATCATATGCATCATCGTCATTATACTCAATCCTAGCATGTCTAGCGAACTTCGTGGGCCCCTGTTTTTCTTCCAAGTTCTCCCTTTTATGTTCGAACCGAACAGCATAGTCGGTGAATCTGTTATGTTCGTGGCCGACTTGTTCAACTTCGGTGGACCGTTCGTGTACTTCATCCACAGCTATATCATCGAAGGCATGACTAATCTTTACGCCGTTGCCATTGGTTACCTGATACCCTTTGTCACACTTATAGTTTTTCTCGTGTCCTACATCTTGAGCTCGAATTTTTACCTCGTCAAATTCAAATTCCGCAAGAACTCCAGCTTGCAGTCGTTTTGGCTGATGACTTTGTTTGTGTACAATTACCTCGCTGTCACAACCTTCATGTTGTTGCACTGTCCTCAAGTTGGTGGCCGGTTTGTTTTTTTCTACGATGGCAACGTCCCGTGCTTTCAAAAACACCATCTTGGAATAACTGTTCTGGCAGTTTTTGTTCTCGTGGTTCTTGTTATTCCTTTTCCAGTTTGTGTGTTTGCTTTAACGCGCGGGTACTGGAAAGTGAACCCACAGTACGTAAGTACACTTACTAACGGCCTGCGCCCAAGGTGCTCATGGTGGTGGTCAGTGGATTTCCTCAGAAGAGTGATGCTGATGGCGACGTACGCCTTGATTCCTGACTGGCACACCAAACAGGTTGTCATGATCGTGATATGTACGCTGATACTGGCCATTCACAGCATTTTCCAGCCTTACAGACTGAAACGCGTCAATGTGGTGGAAACGCTGTACTTGTATATCCTATGTATTATGGCAATTATGCAAGTATTACAGAAGAATGACGTCGCAAATTGCGTATGTTCGTTGCTGTTGATGTCTACTACTGCTCATGCTCTTGCATTAACTCTGTTCAAAGCTGTGACGTTCTTTCAGAAGAGATGCAAGAAGTCTTGTCCTACAACATGCAGACACAGGCGAGATTATGGATCAATTAAGCAGACCCCGGACGTTGAAGAGTCTTTAACATTTGAACAAAAACAGCGCAAGCATATTTTCGACATCATTTTTAGCAAGTCCGATGATTATAGTTTTCCTTTTTGA

Transcript

aflo_s0113.g33.t1

GAGGTATTTCCCATCGTTCTGAAACGAAACTATTCCTTCTCGACTTTGAGGATTTTGGAGTGGATTTTTTTCCTCGCGGCTTGAGAGACTCGCGTGGAATCTTTCTGCGTTTAGGAGCACAATGATTTGGTGGATTTTCATAGCCTCGTGGTTTTCACATGGCTCTTCGCTGAACGTCTCAATTTCACAACAATCTGGTGAAAATAATGTTACTTGTTTTAACCCCAATGGGTCGTTGCCTTGTAAAACCATTAGTTACGCGCTTGGAATTTTAAGCAACGTTACGTTTGACCGAGAAACTACATTTGTATTTTCTCTTTTGGATGAGGTGTTGTTTCTGCATAGTCAAATTTCAATTTTCCAGCCACGAAAGATCAGGGAGATATATTTCACTTCTGCCCACGAATCGAAAAGGACTGTGGTACGATCCAGCTCGGAAAGCTCTGGATTTGTTTTGGGGAGAAAAGAAGCGAGGCGCTCTGTTTCGACATACAATATTCATGTTTCAAATATTGAATTTGAGCTGTTTAGTAAGAAATCGGCTGCCGTGGTCATGGTCTGGAGAGCGGACAATGTGTCATTTACAAATTGCGTATTTCGAAATAACAAACGATCTGGCATAAATGCCTTCGACAGCGGAGTCAAAATAATTAGATGTCTCTTTGTGAACAATTCCGCTAATTCCCAAGACGCGCCTGTCATGGTAGGTAATTCTTCTGTCGCTGGTGGAGCAGGTTTTGTGTTCTTTGAGCTAAGTGGACTAAGTGTTATAGTGAAAAATTCAAACTTTTCGCACAACGCAGCTGTGTATAACAACTCAGAAAATTTTATCGCTCCTCGTTCCCTCTCAGTGCTTCCTCGTCTAAATTTATTAGGTGGAGGCCTTTTGGTGGCATTTCTTAACGACTCAAAATCAAATACAGCCATTGTGGAAGACTCCGTTTTCGAGAAAAACCAAGCAACTTTTGGCGGAGGCTTGCTCCACTGTTCTTGTCACTCCTCATCGGGAAACTCACTGAAAGTTCAAAGATCTATTTTCGCCGGCAATCTGGCAGCGCAGGGTGGAGGTGGTCTGAGCACTTCTGTGTGGGATTTTGGCACAACGAATACACGCATTGAAAATTGCGTTATTCGAGACAACTGGTCAAGGAGAGGCGGTGGAATGAACGTTTTTATCATGAATTATTACTCGTCTGATCTTCAATCGCGGATTTCATTTGTCAATTTGACTTTGGATGGAAATAGAGGGCGCGCTAGCGCAGCAATTCGCCTTGACACGGCCCTGCCCATGAGCTCACCAGTTAATCTTAAACCCGAGTTTATTGACTGCACCATAAAGAACCATGGTGCGAACTATCGGACATACACAGCGCCGTTTACAAGTCAACGAGTTGACATCATGTTCAATGGCAGAAATGTTTTTACGCAGAATCATGGCGCAGGCGCAGTGGAGTATCATGCAGGAGTGATACATGTGGAGGGCAGTTTGAATTTTATTGGCAATTCCGGTTCTCAAGGAGGGGCGGTGTTTCTGAGGTCGAGTCAAATAACGTTGTATCCTGGCAGTGAACTTCGTTTTGAAAAGAACTTCGCCAATGGCAATGGTGGGGCAATTTTGGTGTGGACCCGAGAAATGTACGAGTTTATCCGACCAGATAATCCGGACTGTTTCGTGGTGTACAGCAAAGATAGAACCCCGCCGTCACAATGGAAGGCAAAGGTGTCTTTTATTGGAAACAGCGCCAAAGTTAAGGGCGCGGCCGTTTATATCTCGTCTCTCGATGCCTGTCTATGGTATGAAAAGTACCCGTTTTACAGCGTTGAGAAAGCGCTTCGGTGGAATAACACGTTTGTTTACAATGGAAACTTCATCCATCCGTCAAAAGACTTCAAGCCCTTATCAGGACCCGACTACGACATTGCTACAGACACTCATCACTTTAATGACGAAGATCACGATGATAAAAATATTAAGCTATCGCCTGGCGAGAGAATCATGCTCGATATAGAAGGCTATGACGAACTCAACCACTCTGTGTTTGCCCTTGCTGTTTTCTCACAGAGAGGCATTTCCGGTGGCAGTTCGCCACTTCATCTCAACAATGCGATGCGTCTGTTATCGCCGGTGGAGTCCGCCAAAGTTCCGTTTTCGTATCATGTGGCAAATGACACTTTGTATAATGAGGTGAAAAATGGCAGCGTTCACCGGTTTCAGTTGGAGGATGTGAGGTCTACGCTGAAAAACAGATATTTGTTCAACGTGACAGCGATACCGTGTAGACCTGGGTTCAAGTTTAAGAACACGCGATGTGTTTGTGACAAAAATATCGAAGGAGTCTTATGGTGCAGCAGCGATGGACGGACAGTCTATCTGCAAGAGGGGTACTGGGGCGGAAACATTGATGGTCGCCTAGTAACGTACTTTTGTCCTTCACACTATTGTCAGTGCGAGCGCAATGGAGACCTTCCTGGATGTGTGTTTAACGCGGGCCGAGAAGATGATCAATGCGCTCACAACCGCACTGGAGTGTTATGTGGCAAATGCATGAAGGGGTTGAGTGTTGGGTTAAGGTGGGAAGAATGCTTGCCGCGCGGGGATGGAGGAGCCTGGATAATAGCTGTCGTCGTGCTCCTTATCGTTATCATATGCATCATCGTCATTATACTCAATCCTAGCATGTCTAGCGAACTTCGTGGGCCCCTGTTTTTCTTCCAAGTTCTCCCTTTTATGTTCGAACCGAACAGCATAGTCGGTGAATCTGTTATGTTCGTGGCCGACTTGTTCAACTTCGGTGGACCGTTCGTGTACTTCATCCACAGCTATATCATCGAAGGCATGACTAATCTTTACGCCGTTGCCATTGGTTACCTGATACCCTTTGTCACACTTATAGTTTTTCTCGTGTCCTACATCTTGAGCTCGAATTTTTACCTCGTCAAATTCAAATTCCGCAAGAACTCCAGCTTGCAGTCGTTTTGGCTGATGACTTTGTTTGTGTACAATTACCTCGCTGTCACAACCTTCATGTTGTTGCACTGTCCTCAAGTTGGTGGCCGGTTTGTTTTTTTCTACGATGGCAACGTCCCGTGCTTTCAAAAACACCATCTTGGAATAACTGTTCTGGCAGTTTTTGTTCTCGTGGTTCTTGTTATTCCTTTTCCAGTTTGTGTGTTTGCTTTAACGCGCGGGTACTGGAAAGTGAACCCACAGTACGTAAGTACACTTACTAACGGCCTGCGCCCAAGGTGCTCATGGTGGTGGTCAGTGGATTTCCTCAGAAGAGTGATGCTGATGGCGACGTACGCCTTGATTCCTGACTGGCACACCAAACAGGTTGTCATGATCGTGATATGTACGCTGATACTGGCCATTCACAGCATTTTCCAGCCTTACAGACTGAAACGCGTCAATGTGGTGGAAACGCTGTACTTGTATATCCTATGTATTATGGCAATTATGCAAGTATTACAGAAGAATGACGTCGCAAATTGCGTATGTTCGTTGCTGTTGATGTCTACTACTGCTCATGCTCTTGCATTAACTCTGTTCAAAGCTGTGACGTTCTTTCAGAAGAGATGCAAGAAGTCTTGTCCTACAACATGCAGACACAGGCGAGATTATGGATCAATTAAGCAGACCCCGGACGTTGAAGAGTCTTTAACATTTGAACAAAAACAGCGCAAGCATATTTTCGACATCATTTTTAGCAAGTCCGATGATTATAGTTTTCCTTTTTGATGACTTTTTTGGTGAATAATAGATGCTATCGTTCTGCGCTATTTTTGAGGCATTCAAAGACAGTCTGTCATTCTGGGTGCACTCTGTGGATTTTAGATTCCAGTTGCTGGTTTCCCAATTTCCCAAGTGGATTTAAGATTCTTGTTTCCGGATTCGAAAACCCAGGATCACGACGACCACAGGCATGTATTTTTTTTTCTGGATTTCGAAATCGAGGTCAGCTTGTATGAGGCGAAACACCCGGGGAAGACATCAGATCATGATCCAGCTTTCACCAAGAGACTGAAATATTCAACTAAAGGTTAAAAACGATTGAAAGAACAAAACCTTCAACTGAGCATTTCTTATTTCTTCTCATACAATGGACCTTCGAATTCGTAGCATCAAGCCTCAACAACAAAAAAGAATATCTTCTTTGAGTCTTTTCATGATGAACTGATTCAGCTCTTAGGGAAAACTTGTAATGAATATGCTTAAATAACTGTGACATTTTTGGGGTAACACGCGAGAAATTAGAGAACGTTTTTGACGGTGCGGCAGTGCTccaggtgacctggtgacatcacctggCTGGGAAAACACGGTTACACACCGGTTAGCAGTGTTTTTGACATCACATTTGATCAATGGACGTGCACAGTGCACGAGATATTAACGAAGTACTTACAGAATTTCTTTCAAAATAACTTATGATACCTTTCATCCAAAGAAAAAAAAAAATACAGGAAATGTTGAACCAGATCGATGATATGGATCAGCCTCAAGTTGTGCGCTTGGGAGACGCCTCAATCGCTTCACCTTTCACGTCCAAACTCTCCTCTGTTATGGCCGATGAGGGAAGATATCATAAATTTATTTTGTTTCTGTTTGAAATCTTAATACGTCATGAACTTTTTATTAAAAAGAGATAAAGAAGGAATAACAAAACACGCGAAACAATAACGACAACTAACTCATTAGGCAAAGACATAGCAGAAGTAAATTGTTTTGCATTTATTTTTACTACGAGCTAGTTACGATAAGCAGACCAGTCTTTATTCTGATCATGAATTTTACCCGTTTTACCCGAAAAAAGTTATAGTGTTTTTTTAAGATGTGCATTTGACTTAATGTGATTTTTACAGTTGCTCGCTTTTACGTTAACTAACTGGTCTCGCACAGGAATCTTACGTAATGATTGCAtgaatatttaatgatcaagaacaattatttctgcacgctctacacgcaacacgtgtgcgttctttattttaatacacttctttaccgtcctctttgaaactacgacgagaaatggccaaatttgaagctctgtggagaaTCTCATGACATAACGCTTAAATCTTGCTTTTCTCGAGAGATTTTCAATACCGTATTTGTAAATATTTTTGCACCAGAGGGAATCAAAATATAATTTATTTCTTATACCTTGTATTTTAATATGTTGAAATAAAGTTTATAATATATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02415	Chlam_PMP	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003368	Repeat	Polymorphic outer membrane protein repeat	Interproscan
IPR006626	Repeat	Parallel beta-helix repeat	Interproscan
IPR011050	Homologous_superfamily	Pectin lyase fold/virulence factor	Interproscan
IPR012334	Homologous_superfamily	Pectin lyase fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11319	G PROTEIN-COUPLED RECEPTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24337	CNTNAP3_4; contactin associated protein-like 3/4	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala