Gene detail

Detailed information of aflo_s0126.g83.t1 in Acropora florida

Genomic Location: sc0000126_pilon:801368...823875
NR annotation: XP_015758872.1, PREDICTED: uncharacterized protein LOC107338152 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0126.g83.t1

GAATGTCTTTTTACATAGAGGCTGCCTGATGATGGACTTATAGAAGAAATCCCCAACAGAGTCACCATAAATCCACAGTGTATTAGGTTTCCTTGATGGAGTACCGTGGCTTGCTTGTAATTCTTCTAAAATGGAAATAAAATCAGATGCACAAGGCTGAAAAATGCAAGGATGCAGAGGGGAAGAAAAAACTTTGACATTGGTATTGCTTTGACTTAAATAGCACTGACTCACCACCAAGGTATGGCCTCCATGTTTCGTTTACCCATCTTCCATTGCCATCCCACATGTTGGAGCATTGCATTCCGCAAGATTCATTATCTTGAAAACACATGATCGAACTTTCAGAAAAGAAGTTAATAAGAAGCAGGAGGTCACGCTGTCATGCAGAACTATTAACAGATGCGAATTCAGATTCGCCCACGTTATCCAGCCTCCAGCAGAGATTTCTACAAGATAAGTGGCGCTTTCTTTGTCGCTATTTATGTGTTCCTGTGGATTTCGAAACCAGAGTACGATGAGGTTTTGACTTGGTCGCGCTATGCAAAGGCAAACAGGCTTGAAAACATGCTGCTGCTAAATATTACCAGTAGATTTATATGGAACAAAACGGAAGGGGAACTGGAAAGAGATGAAATGAAGAGTAATAGAAACTCAGAGTTTGTGAGTAACTGGTGTCGCGAAAGACAGGCAAGACTTGATTGGAAGGCTATGCTAGCTTCGTGCGCCGAAGACACAGCGTGGAGTTTGCCAAGAAACCGAGAGAATGCCACCGATCCCAACATGAGCTTCATCTCTTTATGGGACGTTCAACCTGTGGGCGAATACAGTCGCTTTAGTATTCAGTCTCAGACAAAGGCTGGGAAGCTTAAAACACAGGGAGGAGATTCTTGGAGGGTGAGGATACGTGGACCATCTTCAATATCTGCGGTTGTCATTGACCACGGAAACGGAACATATGAGGTGTTGTTCCTTGTGATGGAAGCTGGGGTTTACACACTTCATATAACCTTGGATTTTACTTTGTGTGATGGATTCAGGGATCCTCCTTCCGATTGGTTTATTGTTGGAAATGCTCAAGGAAAGTTTCAGAGGCATCCTGAAGTTGACGGAAACAAGGACTACCTTCAAGCACCTCTGTGGAGTGGGAGTCCTGTACAGATATCGATCCCACCGGCAAAAGATGGAAGTGTCTCGCTGTCCAGTATTCCCGATGAACGCCTAAGATTAATCGCGCGCACAGATTGTGGCATCACTTGCAAATTCATTTGGGACGGACGAGGGCGCTGGGTACAGAACACGTGGAAGCCGCATGTTAAAGAGCCGCTCTGTAGGTCCCAAAATCGCTCCAAAGATGGAACGTTGTGGATTTATGGAGACTCAGTGAATGTGTTCTTTGCGCAGTCGTTAAGACAGCGCAAACTCTGTCGTGAAATTTTCAGCGACTGTAAGTTCAGTTACAATTGGATTTATCCAGTTAAGAATGTCACAGTCGCTAGAAAAGAGAACGACAATTTGGACTACAATAACGAGCGGGTCTTGCTGAATTTTGGCAGAGAATTACAACGCCCAGAGATGAAAAATAACAGCGCCATCATTTTTAATTTCGGTCTTCATTTTGTGGAAAGCATTAACTTTACAAATTACAAGAAGCTGATTGATGGTGTGGGGAATGAACTGGATCGTAAATATCCAGAAATATTTCTATCGAACTCGACTCGATCAAGACGGAATCGTGGAAAAGCGATTTGGAAAACAACGACCGCTATAAACAAAGAGAGAGCGAGCAATATTCATCTTGGAAACAAGAGATTTTTGACGCAACAGCGTATTTTACTGTACAATGCCTTTGCCACAACGCGCATGTGCGAAGCAGGTTTTCACGTACTCGATGTTTATCCAATCAGTGACTCCTATCCGCCAGGGACGGGAACCCACGGTGCCCATGGACCGGTGGGAAACGACATTGTACACTATAGTAACCTAGCCTTCAATCCGGTGGAAGAATTGTTTGAGAAATTCTTTGGCGGAATTTGAATTACTTTAATTTGTTTTTTCGGTTTGTAAACATTACGTAAGATTTAGTACATGGTTAAAGTTTAGAAAAGGAATTCTTAGCTTGATGAATCGATTATTTCGAGTATGACTAACCAATCAGAACGGTGTATCTGAGTTGATAACGGCGGCTTAGTCAGCCAATCAGGAGGCTCGAAAGCCAATTTCCGAGGCCGAAATTTCAATAAATACGAATGTTGACA

Protein

Uniprot

Uniprot term	Description
P13466	Gelation factor OS=Dictyostelium discoideum OX=44689 GN=abpC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036514	Homologous_superfamily	SGNH hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16165	NXPE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan