Gene detail

Detailed information of aflo_s0127.g2.t1 in Acropora florida

Genomic Location: sc0000127_pilon:20936...25402
NR annotation: XP_029186879.2, coiled-coil domain-containing protein 63-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0127.g2.t1

ATGGGAAACAGGAAAGCTAAATTAAAGCAAGAAGAACTGGACGATCTTATGGAATGTACACATTTTTCAAGGAATGAAATTGAAGAGTGGTATAAGGGCTTCATGAAGAGTTGTCCAAGTGGGTCTGTTTCATGCGCAGATTTCCGAGATATGTATTCGGATTTTTTCGAAGGTGATGCGTCAGACTTCGCAAATCACGTTTTCCGAACATTTGACGCGGACAAAAGCGGATTCATCGACTTCAAAGAGTTTCTTTCCTCGCTTTCTATCACCTCTCGCGGAAACTTGGAGGAGAAACTCGAGTGGGCTTTCAAGATTTATGATGTGGATGGTGATGGATACGTCACAAAACCCGAAATGGAAGCTATTATCAGGTCCGTGTACAAGATGTATGCGAACAGTCGATTGGGGAAGAAGGAGACGCCTGAACAACGCACAGCTAAAATTTTTGAAAAGTTTGATGAGGATAAAGATGCCAAAATGCCTGGAATCAGAGATGAAGACAAAGTGGATTCCACTGAAGCACAATTAGAGGCTCAAATGGAGCTAGCGAATATGCTGAGAGTGTATCGCAGTATGAGAACTGACAGGAGATCTTACATAGAGGATACTGAAAACACGGTGCGCAAGCAGAAAATGGCCATTGGAGCACTTACAAAGGAAAACGAGGAGCTGGAATCTATGATTCAAGTGGCGAAAAGTCGGCAAAATGAGATTCAAGACCAACAAAACGTGCAAACGATTGTGGAGCTACTTGAGCGAGAAAAGCAGGTTCATGAGGAAATTAGGGGCGAAAAAGAGGCCGTTGCCCTTGTCGAGGAAGAGGTTGTTTTCATGCATGATTCCATCAACGATCTCTGTAAAAAGATGAAAAAAATGGGGGTAAGCAAAGATGTTTATCACGATAAGTACGTTTCTAGCATCAAGCTCACAAGAGTGATGGAAAACCGGCTGGATGAGATGACTAAGAAATTTAGCATCGCCCTGACTGACAACTCAAAGCTCCGAGAACACATAAGCCATATTGATGGACAAAAAGCCAGGTTTCTTGATATTTTGCGACGTCTGCAAGTTGAAATTTCCGAAGGAAAGAAAGAGATAAGTCGCATTTCGGAACTGGCAGCTGCTCATTACAGCTCAAGGGATGAAGCGCAGCATAGAATGGCGTCTATGCGCGAGCGTGCAGAACGAGATCTGGCCATATTCAACGCCGAAGTTAAGGACCTGATGAGAGTTCTTGCACATGACCGAAAATTACGTGATTTCATGAAGACCAAAGCCGAAGATAGGGTGTCAGTTTTGGAGAATGAGTTGCTGTCACGCACCGTAAAGAAAATGGAGGCTCAAATGAAGGGCCTAAGTCACGAAGCAAATAAATACGAGGAAATATTTGAACAAATAAAGGAAGCCACAGGCATCGAAGATACAAACACTTTGGTAGAGTCGTTTATCGAAAAGGAGGATCATAACTTTGCGTTATTCAATTACATCAACGACATGAACACTGAAACGGAAAATCTGCAGGACGAAATCAAAATTTTGAAGGAAGAGATTGAATTGATTGAGATGGAAGGAGTGGAGAATGATGTGAGGAGAAAGGAAATCCTTCGCGAACTGGAGGAAAAAATGGCGAACGTGACGGAAGAGTTGAGTTCTGTGCGAAAGCACTACAAGCTATGTCGAAGACTGCTGGAACAGCTGAAACCAAGAATCGAATCTCTATTCAACTCAACCAAGTGTAACCGCACAGCCATAACAGATCTTCTTGGAGGCGGAGTGACTGTAGATGATAACAATGTTTTGCAGTATCTCGGACTTGTTGAGCAGAAATGCAACGAGATTTTGCAAGTCAAGGCGATGTTCAAAGTGAAGGCCGCAGCAGAAGAAACAGTCGAGGTATCCATTGATGGATTGCAGGGAGTTGGTCCACAGCCTGCGCATGCGAACTTGAGTATTGTACCTCCACCAATCGAAGACGACTGTGATCAACCTTGGAACGTCAACGATGCCAAACCGCTGACCGTTGAAGAACTTCAAGGGCTAATTATCCAAGGGAATGTGCGGGGTGGCACCAACAAAGGAGCAGGGGTGACAAAGTTGCAGGGAAAACGGAAAAGAGTTTGA

Transcript

aflo_s0127.g2.t1

GCATGTGCGTATTTTTAGTTGCTAAGGGTGACATGAGGACTCGACGAGGGCTTTCTTTTGTCCCCTTGAACCAAACAGGCCGCTATTCTTTCAAAAGCAAGTGGTTAATTAGCGCGTTTCTATCTTTATTTTCTGCTTGCCTGGTGTTCTTCGCGGTTTGTGGAGGCCAGCTTCTGGAAGGTTTCTTTTCAACTCAAAAACAGCCTCATGTAAGACCAAGGAAAAATTCTTAATTAACACCAACAAGCAGCTTCCAGCTTCCAAAAAGCTCTCAGACAACCAAGCAAAACAACGAAAGAAAACGATTTGAGGAAAAAAAATGGGAAACAGGAAAGCTAAATTAAAGCAAGAAGAACTGGACGATCTTATGGAATGTACACATTTTTCAAGGAATGAAATTGAAGAGTGGTATAAGGGCTTCATGAAGAGTTGTCCAAGTGGGTCTGTTTCATGCGCAGATTTCCGAGATATGTATTCGGATTTTTTCGAAGGTGATGCGTCAGACTTCGCAAATCACGTTTTCCGAACATTTGACGCGGACAAAAGCGGATTCATCGACTTCAAAGAGTTTCTTTCCTCGCTTTCTATCACCTCTCGCGGAAACTTGGAGGAGAAACTCGAGTGGGCTTTCAAGATTTATGATGTGGATGGTGATGGATACGTCACAAAACCCGAAATGGAAGCTATTATCAGGTCCGTGTACAAGATGTATGCGAACAGTCGATTGGGGAAGAAGGAGACGCCTGAACAACGCACAGCTAAAATTTTTGAAAAGTTTGATGAGGATAAAGATGCCAAAATGCCTGGAATCAGAGATGAAGACAAAGTGGATTCCACTGAAGCACAATTAGAGGCTCAAATGGAGCTAGCGAATATGCTGAGAGTGTATCGCAGTATGAGAACTGACAGGAGATCTTACATAGAGGATACTGAAAACACGGTGCGCAAGCAGAAAATGGCCATTGGAGCACTTACAAAGGAAAACGAGGAGCTGGAATCTATGATTCAAGTGGCGAAAAGTCGGCAAAATGAGATTCAAGACCAACAAAACGTGCAAACGATTGTGGAGCTACTTGAGCGAGAAAAGCAGGTTCATGAGGAAATTAGGGGCGAAAAAGAGGCCGTTGCCCTTGTCGAGGAAGAGGTTGTTTTCATGCATGATTCCATCAACGATCTCTGTAAAAAGATGAAAAAAATGGGGGTAAGCAAAGATGTTTATCACGATAAGTACGTTTCTAGCATCAAGCTCACAAGAGTGATGGAAAACCGGCTGGATGAGATGACTAAGAAATTTAGCATCGCCCTGACTGACAACTCAAAGCTCCGAGAACACATAAGCCATATTGATGGACAAAAAGCCAGGTTTCTTGATATTTTGCGACGTCTGCAAGTTGAAATTTCCGAAGGAAAGAAAGAGATAAGTCGCATTTCGGAACTGGCAGCTGCTCATTACAGCTCAAGGGATGAAGCGCAGCATAGAATGGCGTCTATGCGCGAGCGTGCAGAACGAGATCTGGCCATATTCAACGCCGAAGTTAAGGACCTGATGAGAGTTCTTGCACATGACCGAAAATTACGTGATTTCATGAAGACCAAAGCCGAAGATAGGGTGTCAGTTTTGGAGAATGAGTTGCTGTCACGCACCGTAAAGAAAATGGAGGCTCAAATGAAGGGCCTAAGTCACGAAGCAAATAAATACGAGGAAATATTTGAACAAATAAAGGAAGCCACAGGCATCGAAGATACAAACACTTTGGTAGAGTCGTTTATCGAAAAGGAGGATCATAACTTTGCGTTATTCAATTACATCAACGACATGAACACTGAAACGGAAAATCTGCAGGACGAAATCAAAATTTTGAAGGAAGAGATTGAATTGATTGAGATGGAAGGAGTGGAGAATGATGTGAGGAGAAAGGAAATCCTTCGCGAACTGGAGGAAAAAATGGCGAACGTGACGGAAGAGTTGAGTTCTGTGCGAAAGCACTACAAGCTATGTCGAAGACTGCTGGAACAGCTGAAACCAAGAATCGAATCTCTATTCAACTCAACCAAGTGTAACCGCACAGCCATAACAGATCTTCTTGGAGGCGGAGTGACTGTAGATGATAACAATGTTTTGCAGTATCTCGGACTTGTTGAGCAGAAATGCAACGAGATTTTGCAAGTCAAGGCGATGTTCAAAGTGAAGGCCGCAGCAGAAGAAACAGTCGAGGTATCCATTGATGGATTGCAGGGAGTTGGTCCACAGCCTGCGCATGCGAACTTGAGTATTGTACCTCCACCAATCGAAGACGACTGTGATCAACCTTGGAACGTCAACGATGCCAAACCGCTGACCGTTGAAGAACTTCAAGGGCTAATTATCCAAGGGAATGTGCGGGGTGGCACCAACAAAGGAGCAGGGGTGACAAAGTTGCAGGGAAAACGGAAAAGAGTTTGAGTTGAACAATTTTTGAATTTTACTTTCTATTGTAATACGATAAATAAAACTGTCCTTCTCTT

Protein

Uniprot

Uniprot term	Description
A9JTH1	Neurocalcin-delta A OS=Danio rerio OX=7955 GN=ncalda PE=2 SV=1
P61602	Neurocalcin-delta OS=Bos taurus OX=9913 GN=NCALD PE=1 SV=2
P62758	Neurocalcin-delta OS=Gallus gallus OX=9031 GN=NCALD PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF21773	DUF6872	Domain of unknown function (DUF6872)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051876	Family	Outer dynein arm-docking/Coiled-coil domain-containing protein	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR049258	Domain	ODAD1, central coiled coil region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21694	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan