Gene detail

Detailed information of aflo_s0134.g41.t1 in Acropora florida

Genomic Location: sc0000134_pilon:664697...676796
NR annotation: XP_029209312.2, U3 small nucleolar RNA-associated protein 18 homolog [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P78750	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3
Q5SSI6	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1
Q9FMU5	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR045161	Family	U3 small nucleolar RNA-associated protein 18	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18359	WD-REPEAT PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan
GO:0034388	Cellular Component	Pwp2p-containing subcomplex of 90S preribosome	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14553	UTP18; U3 small nucleolar RNA-associated protein 18	-	Ribosome biogenesis	ko03009	deepkoala