Detailed information of aflo_s0136.g18.t1 in Acropora florida

Genomic Location: sc0000136_pilon:235833...249215
NR annotation: XP_015778858.1, PREDICTED: nibrin-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JIL9Nibrin OS=Rattus norvegicus OX=10116 GN=Nbn PE=1 SV=2
Q9DE07Nibrin OS=Gallus gallus OX=9031 GN=NBN PE=1 SV=1
Q5RCV3Nibrin OS=Pongo abelii OX=9601 GN=NBN PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16508NIBRIN_BRCT_IISecond BRCT domain on Nijmegen syndrome breakage proteinDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR032429DomainNibrin, second BRCT domainInterproscan
IPR043014Homologous_superfamilyNibrin, second BRCT domain superfamilyInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR040227FamilyNibrin-relatedInterproscan
IPR001357DomainBRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12162NIBRIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

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