Gene detail

Detailed information of aflo_s0142.g57.t1 in Acropora florida

Genomic Location: sc0000142_pilon:574288...578064
NR annotation: XP_015748863.1, PREDICTED: late histone H2B.L4-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P07794	Late histone H2B.2.1 OS=Psammechinus miliaris OX=7660 PE=3 SV=2
P16889	Late histone H2B.L3 OS=Strongylocentrotus purpuratus OX=7668 PE=1 SV=3
P35067	Histone H2B OS=Acropora formosa OX=126732 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000558	Family	Histone H2B	Interproscan
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23428	HISTONE H2B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11252	H2B; histone H2B	-	Exosome	ko04147	deepkoala