Gene detail

Detailed information of aflo_s0145.g49.t1 in Acropora florida

Genomic Location: sc0000145_pilon:541611...547880
NR annotation: XP_029212008.2, max dimerization protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0145.g49.t1

GACATATATCTTGTTTTCGTTTTGATAATATTTACGATCCTCGCACAGCACATGCAGCGCAGAGGAAGTTTTGTCCTTCAAAATCCGTTTTTGGCACGAGAAATTTTCATCTAAACAAAAGCTATGAATATCGACCAGCTTCTGCAAGCTGCCAGAATCATTGAACAAAGGGATGAAGCGAAGAAGCAAACTCAGGCGCCTGTCAAACGTGATAGAAAGCCCACAAAACGGTCTCAGAGCTACAGCCGTACGACACACAACCAGTTGGAGAAAAACCGACGCGCGCATCTGAGAGATTGTCTTGAATTGTTAAAAGAACTGGTCCCTTCGCCTCCCGAACATCAGAAAGCAACAACTCTAGCTTTGCTGCAAAGCGCTCAGCAATACATTCAGGTGCTGCAAATAGCTGAAAAGGAAGCTTTAGACAAAAAGAGGCAGTTAAATCAGGAAAGATATGACCTTCAAAGAAGACTGGCTGCCCTTCAAGGCAGTAGTGAGAAACCTGCTATGATTGGTGTTAAGAGGCCACGTCATTCAGAAGGAGAGTCTTCTACTAGCAGCGTGGAGATTGATGTAGAGAATGATGAAACGGGATACGCCAGCAGTGAGTCTGACGATAGATTTAGCATTGGAAGCAGCACTGGGAGTGATGGGGGGTTAACAGCGAATTCAAGAAGAGTGTAGTGTGTTGTTAACCTCTGGCATAGAATTCTGTGATGTCATTAGTGGCTTCTGCTTTTCTTGATTAACACTGATGTTTTGGTGCAGGTAATATTAGAAAATTATTATTCAAGAACAATACCGCCAGAAGTCTGTCACCTGGCTGTTGATCCTGTTTTATTGAACAGACTGCCCTGTCTGACCCATCTATGGACAAAGTATTAATAAATGGATCACAAACAGACAGGTGACAGATTTCTGGTAGAGCTGTGGTTGCAGTCTTTTTGTTTGAGCATGGTGCAGCCATTATGCATCTCCAAATTTATCATGTCTTACAGACAAACTAATTGTCCAAGCTTTTCTCTCTAAGAAATGAAACCCATTCTGCAGTAAACTATATTCAGAAACCTAGAGTACATTTTGGTTTTCATAATTTTCTTGCCAAGTGGTTGGTGTTGAAGAAATCTTTTGTGTTCCTAGATGTTTCAGTAGCAACTTGAGGTTCGGTTTTTGTATCAAAACATCGTCCCTTTTGTATCTGTTTCAATTCCTCCATTTCACCGATTCTTAGTCTAGGCATTCTTAGCCTTAATGACTTCTGTCAATAAACAGTCCTCTTTTTTTAATGTTGAGTAGAGATAAATTAATATTATTGTGGTTAGTGGAAAACAGCTCTTTAATTTATCGATGAATATTAATGAGAGTTAATTTGCAAGGAGCAGTTTATGAACCTTTATGAAAAGCAACAATAATAACAATTGTATCTTTCATAATTGTTTTTATTGTTAACAAGGTTTAATATCGAATTCTGCACTTCAGATCATTTTGAGTTCCAAGTATTGAGGAAAAGCAATTTTATATTATTATTTTCAACTGATATTTTGTCAGAATTTAGTAATGCTTTTGGTTCTTCTAAGAACAGAAAATAGTCAAAATAATAAGACAAGGAAGAAGAGGAAAGGAATCGAGGTGAAAAGGTTACATAATTGAAAGTAACCTTTTCTCCTTTTTTTTCAGTAATGCCTTGATTATTGTATGAATTATCTTTGGTTTTTTTTCGGTAAAATGAAAGTTGCTACCTTTAATTCACAATGGTGCTCACATTTCGAAGACTGTTATTTCCTTGAATTCCTCATCTTGAATTTCTGATATACAACAAAGATCTTTACTTTTGGTGTGTATCTTGACAAATCAACTTCACCAAAATACATCACTTAACAGGTTTGAGGATTTTAGGTGTTAGTAAGAAAATTGGTAATCATGTACTTTTGCAGGCTGAAGATTTCTCCTGTTAAAACTGAGTGGGATAAAAATCTTTGTGAAAGCTTCCCTGTAGATAATGTAAATTGCATTTATTACTGATGTAAATTCCTCATCTTAATTAGCAAATAAAGTGTTAAATATTAAACAATATACAGCTATTTATGTGGGTTTCCAAGACAGATTCACAAAGATCTCCCAATGTATCCTATCCAATCGAGTTTAGCGTCTGCAGAGCCATCATTGGTAGTGTTTGTATTTTTAATGTGATCTGTAAATAATGTGTATTTTTAAAGTGAACAGAGAGAAGTGTACCTAAGATGACATTTTTTATAAATTATTATTGCCAGAGTTTCAAGGAATAGCAAATAAAGGTGCTTAAAACAT

Protein

Uniprot

Gene family

Uniprot term	Description
Q05195	Max dimerization protein 1 OS=Homo sapiens OX=9606 GN=MXD1 PE=1 SV=1
Q0VFI9	Max dimerization protein 1 OS=Xenopus tropicalis OX=8364 GN=mxd1 PE=2 SV=1
P50538	Max dimerization protein 1 OS=Mus musculus OX=10090 GN=Mxd1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11969	MAX DIMERIZATION, MAD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09114	MXD, MAD; MAX dimerization protein	-	Transcription factors	ko03000	deepkoala