Detailed information of aflo_s0158.g4.t1 in Acropora florida

Genomic Location: sc0000158_pilon:56816...63889
NR annotation: XP_015751597.1, PREDICTED: roundabout homolog 3-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
O89026Roundabout homolog 1 OS=Mus musculus OX=10090 GN=Robo1 PE=1 SV=1
Q9Y6N7Roundabout homolog 1 OS=Homo sapiens OX=9606 GN=ROBO1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF08005PHRPHR domain DomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013098DomainImmunoglobulin I-setInterproscan
IPR012983DomainPHRInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0098609Biological Processcell-cell adhesionInterproscan

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