Detailed information of aflo_s0162.g9.t2 in Acropora florida

Genomic Location: sc0000162_pilon:147144...162365
NR annotation: XP_015772882.1, PREDICTED: barH-like 1 homeobox protein [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q24256Homeobox protein B-H2 OS=Drosophila melanogaster OX=7227 GN=B-H2 PE=1 SV=3
Q06615Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto PE=2 SV=1
Q91770Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan
IPR001356DomainHomeobox domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

TOP