Detailed information of aflo_s0163.g1.t3 in Acropora florida

Genomic Location: sc0000163_pilon:22570...31635
NR annotation: XP_044163212.1, TNF receptor-associated factor 6-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61382TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN=Traf4 PE=1 SV=2
Q6DJN2TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1
Q9BUZ4TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012227FamilyTNF receptor-associated factor TRAF, metazoaInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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