Detailed information of aflo_s0163.g64.t2 in Acropora florida

Genomic Location: sc0000163_pilon:617499...649227
NR annotation: XP_015762499.1, PREDICTED: uncharacterized protein LOC107341571 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DFV5Probable helicase with zinc finger domain OS=Mus musculus OX=10090 GN=Helz PE=1 SV=2
P42694Probable helicase with zinc finger domain OS=Homo sapiens OX=9606 GN=HELZ PE=1 SV=2
E9QAM53'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087AAA_12AAA domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0010587Biological ProcessmiRNA catabolic processInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan

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