Detailed information of aflo_s0166.g24.t1 in Acropora florida

Genomic Location: sc0000166_pilon:680910...757552
NR annotation: XP_044177064.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114971281 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NYQ6Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens OX=9606 GN=CELSR1 PE=1 SV=1
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q9UN70Protocadherin gamma-C3 OS=Homo sapiens OX=9606 GN=PCDHGC3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR051216FamilyTeneurin domain-containing proteinInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR039448DomainRight handed beta helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11219TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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