Detailed information of aflo_s0187.g20.t1 in Acropora florida

Genomic Location: sc0000187_pilon:307146...368740
NR annotation: XP_029206289.2, 60S ribosomal export protein NMD3-like isoform X4 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96D4660S ribosomal export protein NMD3 OS=Homo sapiens OX=9606 GN=NMD3 PE=1 SV=1
Q5RC8260S ribosomal export protein NMD3 OS=Pongo abelii OX=9601 GN=NMD3 PE=2 SV=1
Q6GNS360S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21192NMD3_OBNMD3 OB-fold domainDomainInterproscan
PF21193NMD_SH3NMD3 SH3 domainDomainInterproscan
PF04981NMD3NMD3 family FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048898Domain60S ribosomal export protein NMD3, OB-fold domainInterproscan
IPR039768FamilyRibosomal export protein Nmd3Interproscan
IPR048899Domain60S ribosomal export protein NMD3, SH3 domainInterproscan
IPR007064DomainNmd3, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan

TOP