Detailed information of aflo_s0187.g28.t1 in Acropora florida

Genomic Location: sc0000187_pilon:529203...533600
NR annotation: XP_029206265.2, uncharacterized protein LOC114970077 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O01761Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans OX=6239 GN=unc-89 PE=1 SV=3
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
A2AAJ9Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF08005PHRPHR domain DomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR012983DomainPHRInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10075BASIGIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0070593Biological Processdendrite self-avoidanceInterproscan
GO:0098632Molecular Functioncell-cell adhesion mediator activityInterproscan

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