Detailed information of aflo_s0187.g32.t1 in Acropora florida

Genomic Location: sc0000187_pilon:571011...595879
NR annotation: XP_029206279.2, protein ZGRF1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0VGT45'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
Q86YA35'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3
Q09820ATP-dependent helicase upf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=upf1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087AAA_12AAA domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF06839zf-GRFGRF zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR010666DomainZinc finger, GRF-typeInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan

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