Gene detail

Detailed information of aflo_s0190.g9.t1 in Acropora florida

Genomic Location: sc0000190_pilon:227996...231805
NR annotation: CAB3980395.1, Transposon TX1 uncharacterized 149 kDa [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0190.g9.t1

ATGAATATGGCGCAGAAAACTCCAACTAAAGTTGTAAACACGAAGATTTGTCGCAAAACATGCTGTTGCAAGCCCTTGAGTTCTAATGATCGCCCCATTTTACTTTTCGGCGAAAAGTCCCAGAGGGAAGCGATCATGGAAGGATACAACGAAATTACTGGTCTCGAAGCAAGTGAAAATGACGGATTGTCACAGTTTGTATGCCGGTCTTGTGCTCGGAAAATAGCAACGTTTAAAGAGTTCAAAACTCTCTGCAGAGAGTCCGATAGTAAACAGAGGGCCTACCATTCAAAATCAGAGAATACACGCATAAAGAGGGGAAAGAAGCTTGAGGAAAGCCCATCGGGTCCCACCGTATCGCCTTCAACAGCACACACAAGGAAGAAAACCCGACCAGTAGCAAGTCCACCTGTGAAGATTCGGCTGGCTTGCCGGTTTCGGTCGGCGAGCCCTTCCACTACTGGTCTTATACAAATAGCACCCAGACCAGCAGTTCAAACTGTGCAGCTTTCTGATAAAGATTCCACGCTATCGAGGGCTGTCGACGACATTGCACACAAATGGAAGAAGCGTCATGAGTCAACTGATGCCACCCGAAATTTACCAGAATTTCTTAAACCTAAAGCTTTAGACAAGGTTGGCGTAGCCAGAAAACAAGGAGTTGATATTCTTTCCTCCTCTGGACTCCACAAGAACAAGGTTGCCGAGCTTCCTGCTGCAGGGACCATCGGGGTGCTTACACCTGAAGAAAAAGAAAAACTGGCTGCAAAGATAACGGCATCATCACTTCCAGCTCTGACAAAAGCCATGATGGAAATACCACTCATTAAGAGTTGTGTGAAAGTTATCATGCTGCAGGATATTGATAGTCAGTGCCAAAAGCTTTGTCAGAAGAAAGAAAATCCGTCTGTTCTTCGAATGACAAAGGACAGGGAAAAGAAACTAAACGAATTTAAATGGGTCTCTGTTCTGACTGAAATGAAGGAAAAAGCCCCTGATGTACTGCTGTGGCATTACCAAATGTTAAACCAGATGACAGCCAGAAACAGGGAGTTGTCTCTGGTACAGAAAGTCAATGCAGTGATCCTTGGTTCTGGGCATGCATCTAAGAAGACATTTCATAGACTGAACAAGACTGGTGTAACACAGAGCAGGGACAGTTTACTAAACATCATGGACAGTGTTGGTGGAAATATCAAATCAGAAGTTCAGCAAGTGCTTCAAACCAATAGCAGCCTTCGGATTGTATTTGATAATCTAGACTTTACTGTCCTTGCGAACATAATATTAAAGAACCACAGAAATTCTGATATACATTGGATAGGGCACTATGTTACATTTGATAGGGTCCCATCTAGCCACCTAGACAACACTCATCCACTTATGACAAACATTAATGAATTCAATAACACCAACTACTTACTTAGTGAGGATGAGCTGAAGAAGTTGAAGAGTGACTTCACCATACTGGTAGCCAGGGTTCTAGTTCAGTTCTTCCCTTGTCTGAACCATCTAACAAGTGCTGTTATCATCCACATACCACACAGGTATTCCAAAGAAATGGAAAAGAAGTCTACCATGATCGGCCTGCCAATTGTCCCTTACAATCAGAGCAAACACGCAGATATAGTCCAGTACCTGGAATATATTGAGGATTTCTTAATGAAAGCCTACGCTCCTGATGGTGAACCCCCTGTGCCACCTGGGGCCTCTGCTGAGGAAGAATCTGCTAGGAGGGAAAGAGTACTAAAAAATGTGAATGTGCCTCTTTGTGGTGACCTACTAGGACGTGAACGGGTGACAGGGGCCAAGAAAACAAGAATGGGGTGTGACCTACACACCGAGCGTTTCGACAATATCACAGAGAATGTGACCTTGTGGCATGCAAAGCAGTCATTTCTTGGGGTAAGTTGTTCCAATAAGAAGTTAGAAAGACTGCAGTTATTGTTAACTGTTTCATTAAACCTGTCTGTTGCTGAAAATAGGACAGACACTGGGTAA

Transcript

aflo_s0190.g9.t1

TACCGGAAGTAAAATTGGGGGAATGGCTGTGTCAGCAAAATCAGAACAGCTGAGCGCGAATTTTAATTATAATTCGCTTTCAGCTGTTCCGATTTTGTTGACACATTCATTTAAATGAATATGGCGCAGAAAACTCCAACTAAAGTTGTAAACACGAAGATTTGTCGCAAAACATGCTGTTGCAAGCCCTTGAGTTCTAATGATCGCCCCATTTTACTTTTCGGCGAAAAGTCCCAGAGGGAAGCGATCATGGAAGGATACAACGAAATTACTGGTCTCGAAGCAAGTGAAAATGACGGATTGTCACAGTTTGTATGCCGGTCTTGTGCTCGGAAAATAGCAACGTTTAAAGAGTTCAAAACTCTCTGCAGAGAGTCCGATAGTAAACAGAGGGCCTACCATTCAAAATCAGAGAATACACGCATAAAGAGGGGAAAGAAGCTTGAGGAAAGCCCATCGGGTCCCACCGTATCGCCTTCAACAGCACACACAAGGAAGAAAACCCGACCAGTAGCAAGTCCACCTGTGAAGATTCGGCTGGCTTGCCGGTTTCGGTCGGCGAGCCCTTCCACTACTGGTCTTATACAAATAGCACCCAGACCAGCAGTTCAAACTGTGCAGCTTTCTGATAAAGATTCCACGCTATCGAGGGCTGTCGACGACATTGCACACAAATGGAAGAAGCGTCATGAGTCAACTGATGCCACCCGAAATTTACCAGAATTTCTTAAACCTAAAGCTTTAGACAAGGTTGGCGTAGCCAGAAAACAAGGAGTTGATATTCTTTCCTCCTCTGGACTCCACAAGAACAAGGTTGCCGAGCTTCCTGCTGCAGGGACCATCGGGGTGCTTACACCTGAAGAAAAAGAAAAACTGGCTGCAAAGATAACGGCATCATCACTTCCAGCTCTGACAAAAGCCATGATGGAAATACCACTCATTAAGAGTTGTGTGAAAGTTATCATGCTGCAGGATATTGATAGTCAGTGCCAAAAGCTTTGTCAGAAGAAAGAAAATCCGTCTGTTCTTCGAATGACAAAGGACAGGGAAAAGAAACTAAACGAATTTAAATGGGTCTCTGTTCTGACTGAAATGAAGGAAAAAGCCCCTGATGTACTGCTGTGGCATTACCAAATGTTAAACCAGATGACAGCCAGAAACAGGGAGTTGTCTCTGGTACAGAAAGTCAATGCAGTGATCCTTGGTTCTGGGCATGCATCTAAGAAGACATTTCATAGACTGAACAAGACTGGTGTAACACAGAGCAGGGACAGTTTACTAAACATCATGGACAGTGTTGGTGGAAATATCAAATCAGAAGTTCAGCAAGTGCTTCAAACCAATAGCAGCCTTCGGATTGTATTTGATAATCTAGACTTTACTGTCCTTGCGAACATAATATTAAAGAACCACAGAAATTCTGATATACATTGGATAGGGCACTATGTTACATTTGATAGGGTCCCATCTAGCCACCTAGACAACACTCATCCACTTATGACAAACATTAATGAATTCAATAACACCAACTACTTACTTAGTGAGGATGAGCTGAAGAAGTTGAAGAGTGACTTCACCATACTGGTAGCCAGGGTTCTAGTTCAGTTCTTCCCTTGTCTGAACCATCTAACAAGTGCTGTTATCATCCACATACCACACAGGTATTCCAAAGAAATGGAAAAGAAGTCTACCATGATCGGCCTGCCAATTGTCCCTTACAATCAGAGCAAACACGCAGATATAGTCCAGTACCTGGAATATATTGAGGATTTCTTAATGAAAGCCTACGCTCCTGATGGTGAACCCCCTGTGCCACCTGGGGCCTCTGCTGAGGAAGAATCTGCTAGGAGGGAAAGAGTACTAAAAAATGTGAATGTGCCTCTTTGTGGTGACCTACTAGGACGTGAACGGGTGACAGGGGCCAAGAAAACAAGAATGGGGTGTGACCTACACACCGAGCGTTTCGACAATATCACAGAGAATGTGACCTTGTGGCATGCAAAGCAGTCATTTCTTGGGGTAAGTTGTTCCAATAAGAAGTTAGAAAGACTGCAGTTATTGTTAACTGTTTCATTAAACCTGTCTGTTGCTGAAAATAGGACAGACACTGGGTAATGAGCTTGGGTCATTTCTCAGAATGTGCAAAATGTAGATACAGTTGATGAATGCATTCCATCTGGGTCTTTTAAGGTGCCCTTTACCGTGGCCCAAAAATAAATTGGGGAAATGGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07776	zf-AD	Zinc-finger associated domain (zf-AD)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012934	Domain	Zinc finger, AD-type	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan