Detailed information of aflo_s0192.g34.t1 in Acropora florida

Genomic Location: sc0000192_pilon:568511...608272
NR annotation: XP_044163420.1, LOW QUALITY PROTEIN: usherin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q2QI47Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46957CYTOKINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP