Detailed information of aflo_s0193.g38.t1 in Acropora florida

Genomic Location: sc0000193_pilon:445906...470955
NR annotation: XP_029199210.2, uncharacterized protein LOC114964052 isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RF77E3 ubiquitin-protein ligase CHFR OS=Pongo abelii OX=9601 GN=CHFR PE=2 SV=1
Q6P256E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis OX=8364 GN=chfr PE=2 SV=1
Q96EP1E3 ubiquitin-protein ligase CHFR OS=Homo sapiens OX=9606 GN=CHFR PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00498FHAFHA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR052256FamilyE3 ubiquitin-protein ligase CHFRInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16079UBIQUITIN LIGASE PROTEIN CHFRInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0007093Biological Processmitotic cell cycle checkpoint signalingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

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