Detailed information of aflo_s0206.g4.t1 in Acropora florida

Genomic Location: sc0000206_pilon:44527...80165
NR annotation: XP_029211526.2, semaphorin-2A-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24322Semaphorin-1A OS=Drosophila melanogaster OX=7227 GN=Sema1a PE=1 SV=3
Q60519Semaphorin-5B OS=Mus musculus OX=10090 GN=Sema5b PE=2 SV=2
Q9P283Semaphorin-5B OS=Homo sapiens OX=9606 GN=SEMA5B PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01403SemaSema domainRepeatInterproscan
PF01437PSIPlexin repeatFamilyInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001627DomainSema domainInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000082DomainSEA domainInterproscan
IPR016201DomainPSI domainInterproscan
IPR027231FamilySemaphorinInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0050919Biological Processnegative chemotaxisInterproscan
GO:0071526Biological Processsemaphorin-plexin signaling pathwayInterproscan

TOP