Detailed information of aflo_s0219.g46.t1 in Acropora florida

Genomic Location: sc0000219_pilon:579212...590822
NR annotation: XP_015748703.1, PREDICTED: polycystic kidney disease protein 1-like 2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
A2A259Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1
Q9P0L9Polycystin-2-like protein 1 OS=Homo sapiens OX=9606 GN=PKD2L1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF06990Gal-3-0_sulfotrGalactose-3-O-sulfotransferase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051223FamilyPolycystinInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR009729FamilyGalactose-3-O-sulfotransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0001733Molecular Functiongalactosylceramide sulfotransferase activityInterproscan
GO:0009247Biological Processglycolipid biosynthetic processInterproscan

TOP