Gene detail

Detailed information of aflo_s0230.g10.t1 in Acropora florida

Genomic Location: sc0000230_pilon:110419...113745
NR annotation: XP_015762722.1, PREDICTED: protein BTN1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0230.g10.t1

CTTGATATGCTGACCAGATTCTTTGCAAAAGCTTTATTCCAACCATCCTTCCTCTCATATTTGGTGGTCTTTCGATTCCTGTCCAACCTACTGAGGCAGCGTCGCGTTATCTGCGCTGTTCTAATTCCTTTGTCAGCCTGTGCCCATTAGCGTATCATTAAAGAGCGGTATTAAAGATTCTGTGACAGGTTGTAAGTGTATTAACAACAATTCGATTTCTGACTTGTACTGGACTCTTCCACCGGAGAAATTCGAAAAAAGAGGAAATGATAGACTCGATCCTGTCTCATGTCTGATGCGGTGCAATGTTGTTCACAGGAAATTCTTGCCCTGCTCAACTTTGTACAGGGTCGACCATGAAACTTAACCAGGGAGATGTAAGCTGCCAGAAACAACAGACAACGAGTAGGTTACAGGTGTGTGGGTTCGTGCACTCAACAGGTCACTGGCTGGTGCTTTTTGCTGTTGTGATAAAATGTAAACCCATGACCAACAGCAGGTAAAAGGAAAATATATCTCAATACAATTGTCGTTCAACTTACAAATTGCATACGGAATTCTGACCTGTTCAAATAACCAGAGACAAGAACTGAGGGTCGCTCACGGTGCCAGTTTCGTCTCATCATCGATGAACTGACGAATGTGTTGGTTGTGAAGAGAGTGGTGTGATTTGCTCCTTATGACCACTTCAGTGAGTCTTAATTGAAATGGAAACTGTGACGGAAAATGATCTGATGGCTCATCACATGGATTCTGTAGTGAAAAACTTACGTTAGCACTCAACAAGAAAAGTTTAAAACAATTTTTTTACTGCGAATATTAAAGGGTCAAGCACGATGGGCGTTGAGGGCAAAGAAAAAGGCCGAAATATCTTATGCTTCTTTTTCTTTGGCATGCTGTCCTTAATATACGACGAAATATGCCTGGTTGCAGCCGAAGACATTTTGGCAGGGTCGACAATCCCAACTACAGTGGTGATAATATCAATAGCAATACCAGTTCTACTCATAAAGCTTATAACTCCATGGTTCCTCCAACACGTTTCTTACTTCAAGAAAATAGGCCTCGTTTTCATACTTTTTCTCGTGGGTTTGGTATCTTTGGTTTTGTCACCGCGCATCTCAGGACGACTTGCGGGTGTAAGCATCGTAGAATCTGGGGTGGCTACAAGTGAGATAACACTGCTTTCCCTTACCGCATTTTATGAGCACATCACAGTTAGTGCCTTCGTGGCTGGTGTGGGAGTTTCTTCGTTTGTTGGGCCTCTTTATTATACTAGTTTAACGACGTGGACATGTTTATCGCCCCGAGGGACAATCATGATGACTATTCCATGGCCCCTGTTGTTCTTTGTTCTCTTCGCCCTCCTAGATAAAGAACGCTTGTTACAGATAACGTTGCCTAGCCCACGTAGCGAAGAAACTGAAGAAGACAATTCGGGACAGGACACGAAACAATTCGTGAACTTCAAAGATAAATTAAAAGTGGCGAAAAAGATATTTCCATATATGACTTTTCTTTTTATAACGTACTTCTCGGAGTACCTTTCAAACCATGCTATTATAACAACCATTGCATTCCCAAAGGCACCTTTTCAACCGCGAGATCACTACCCTTATTATTTACTTTCGTATCATGTTGGCAAGTTCCTCGGCAGGTCACACTTGTTCCTTGTCTCTGCTGTCTGTCCTGGTATAGTTCCCTATATCAGGGTTAGAAGTACTTGGATTTTAGCACTGATAGCGTGTTTACACGGCTTTATATTCTTCCTCGCGTCTTGGTTTCGATTTATTCCAGGAGTGGAAATAATTATCGCACTTTGCTTCTCCGAAGGTTTCACTGCGGGATCCATGTACCTCAACTCTGCGCACACAGTCTCTGACTTGATAGAGAATGATGAGAGAAGAGGATTTGCCCTGAGTCTGTTAACCGTAGGAAACGCCTGCGGGAAGCTTGGGGCTGGCTTAGTAGGCTTGTTTCTAGAAAAGATCCTAAAGGAACGCTGCATTGCAACCCTCAAGCTGGGGGAATACTGTTTAACAAGGCATGAACACAAGGCTGGTTGGCATAAAAATGTACATTGTTGAGTGAAAGTGAAtctgtggttaataaaggtcaggctgcatggttcggcttggcatggctaccaATTGTGTGTGAGAACTAAATTTCATTGACAATCTTACAATCTAGAAATTCCATTGCCATTGACAGATAAGGGCCTGGGGTGAGTTCCATTTCAGTGAGGGGAGATTTGCCACAGGGGTTAACAGAGGGTCTTCATTTTTTCCTCATCATATCTGCATCCTGCAGGAGGGGGTCAAAATCCATCATGATATGAAATGTGCCATCCTTCAGTAGCTGAACTTAATATATGATCTTGAATCAC

Protein

Uniprot

Uniprot term	Description
Q6CLN9	Protein BTN1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=BTN1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02487	CLN3	CLN3 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003492	Family	Batten's disease protein Cln3	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10981	BATTENIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005773	Cellular Component	vacuole	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0051453	Biological Process	regulation of intracellular pH	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12389	BTS, CLN3; battenin	-	Lysosome	ko04142	deepkoala