Gene detail

Detailed information of aflo_s0232.g18.t2 in Acropora florida

Genomic Location: sc0000232_pilon:366939...381445
NR annotation: XP_029209105.2, target of rapamycin complex 2 subunit MAPKAP1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0232.g18.t2

TTTTCCTTATTCCTCAATTAGCAAGAAAATGGGCCCTCTCCTTCTATGCCATAAACGAAGAAAATAGCGAATGCATGGTTAAATTTCCAGGTAAAGTACTAAGAGATCAATATGGCCTTCTTGGATGATCCAGAATTCATCATCTCTCACATCCGCCATTCCTGCGTTATTACTGATGATACAGGCATGTGTGAGCAAGTGATCTTGAATGAAGAAGTAGAAAATGAGAAAGTGAAAAAACATCGCAAGATAATCAGTTTTGGAAGGTACTCCATGGACAGGGATGTTCTGGACTTCCCAACCTATCCTCAGTCGTTTGACATTGCTGTTAGTCCAGACCTGAGGAATCCCAAATCACAAGAAAAAGGAGATCGGAGTAGAAGAGAAAGAAATGCTGAAGTTAAATGTAAGACAGTCTCATGGAAGGAAGGAGAAACCAGTGGAAAAATGAGTGCAGATGATTTGTCTGATGTGTTTGGCAAGCGTGAAGTGAAACAAGATAAGAGAAAAACTGTGACAGTCTCTCAGCTTAGCAGGCAGCTGGAGGAATCCCTTGGCAAACCAAACAATCCTTTTCTGGAGTACTCAAAATTTGATGGAGAGTCTTATCAAGGAACATGTACCACCATGGAGTTTAGCATCTTTTTAACAATGCAGTCAGAGGACCTCATTGGCTTGATCATGTACAAGTACACGAGTGAAGGACGCGATCCACCACTAAAGAATGACGTCAAATCATACTGTTTACAAATAGCAGAGGATGATGGCGAAGTGGACACCGACTTCCCTGCTTTGGACAACAAAGAACAAATAACAAGATTCTGTTTTACTTGCCTGGCCCTGGTTCAGAACGACACCAGTCCAGTGAAACCAGTTCAGCCCAAGCCCTCCTCCGGCGTCATAGTCACTGTCCATGAACCTCAACACGGCTTTTCAAGAGTAAAAGTAGAGAGTATGCACACCAGAATGAAACAGGTTTACGAGAAAATGATCAAGAAAAGAGGACTAAAGCGAACAGCCAATGAATATGTCCTGGAAAAACTGTCAGATCCCGGAGTGCCTATCAACCTTGAATCAACTTTAGAAAGCATGGGTTCCATGGAATTTTGTTTGGTCAGATTCGGGCGTCGAAAACCTGCGGATGGAGACAAAGATATCGATCCAAACCGATTTGATTTCTATGCTAATTATCAGTTCCAGACATATCGAGTCAGCATGCTGCAGAAGCTTAGACCCGTGACGGAGATTCAGCTAAGTGTTTCTCAGGAGAGAATAGAGATCGATCCCGTTCTTCAACCCAAAGCTGCAAAAAAATTTTGGGGGAAGCAGAAATTCACATCAGTAAACATGGAAAATGTCGTAGCTTGCGAACTCTTGGAGGAGAAGAGTAACGGCAAAGCGCAGTTTAGAATAGTCTACTTTAGTCAAAATGCCCGAGAATTTAAACATTACGACTTTGAAACAGAAGCCAATGTTTCAGGCGAAATCGTTAAAAGAGTGTCACACATAATTAACTCCAACTCAAGCGGCAAACGATCAGAGTTCCTGGCTTTGAAGGAGAAAAAGCTGGAAAAGAGACGATCATTCAGATACTAAACGCCAAATTTTGAGATGTCTCTTGTTGTATATTTATGTCAGGTAATTGTGTCTCTGCTCCGTGCCTAAAACATCATTTAACGCGCAAAAAGTGCTCCATGTAAGCTCGCTCGTTTTTGCAATGATGTAGTCCCACTCATTGCCTTGATCGGATGGCGTGGGGAGAAAAGCGATCAAACAAGGACTGAAAACAAATGGAATACACAATTTGAAAGCTAGTGAAGCTTCAACGTAAACCACATGTTGTTTTAAGGAAAATCCATTTCGAGATTCCATTGCATTATATTTTATTTGAAGAAACAACACCTCATTCTTTACGCAGACGATATTTCCACCTTCTTCCCTAGATCTTATCTATGGACTCTGAGAATTACGAAAGATTAGATCGCAAAAACTTCGATATGTGCTTGATAGAAAACATATCATCGACCGGCTGAGACGGTTTAGAGACAAGGCGTAAGGCGTTTTCGTCGACCGTAATGAACTTATAAAGGGATG

Protein

Uniprot

Uniprot term	Description
A4IIM3	Target of rapamycin complex 2 subunit MAPKAP1 OS=Xenopus tropicalis OX=8364 GN=mapkap1 PE=2 SV=1
Q9W6S3	Target of rapamycin complex 2 subunit MAPKAP1 OS=Gallus gallus OX=9031 GN=MAPKAP1 PE=2 SV=1
A2VDU2	Target of rapamycin complex 2 subunit MAPKAP1 OS=Bos taurus OX=9913 GN=MAPKAP1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16978	CRIM	SAPK-interacting protein 1 (Sin1), middle CRIM domain	Family	Interproscan
PF16979	SIN1_PH	SAPK-interacting protein 1 (Sin1), Pleckstrin-homology	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031567	Domain	Sin1, middle CRIM domain	Interproscan
IPR008828	Family	TORC2 component Sin1/Avo1	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR031313	Domain	SAPK-interacting protein 1, Pleckstrin-homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13335	TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005546	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0031932	Cellular Component	TORC2 complex	Interproscan
GO:0038203	Biological Process	TORC2 signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20410	MAPKAP1, SIN1, AVO1; target of rapamycin complex 2 subunit MAPKAP1/AVO1	-	Membrane trafficking	ko04131	deepkoala