Gene detail

Detailed information of aflo_s0263.g27.t1 in Acropora florida

Genomic Location: sc0000263_pilon:312017...327515
NR annotation: XP_044168850.1, myotubularin-related protein 6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0263.g27.t1

CTTTCTTTATTTCAGAAAATCTTCAAGACTTGTATGCATTTTCATACAACCCTATGAGTGAGAAGCTAACAAGGTCTGCAGGATGGGCTTTGTTTGATGTACAATCTGAGTTTGCGCGAATGGGACTGCCCAACAGTGAATGGTGTTGCAGCTCTGTGAATAAGGAATACCAGATTTGTGACACATATCCTAGCATTTTATACCTGCCAGCCTCTGTGTCCTCTTCTGTTGTTATTGGGAGTTCAAAGTTCCGCAGTCGTGGAAGACTCCCTGCATTGTCTTTTCTTTACAAGAAGACAAAGGCTGCAATTTGTCGTTGTAGCCAGCCGTTATCTGGTTTTAACACGAGATGTCAAGAAGATGAGATGCTTATTCAAGCTATCCTGGACACAACACCTGATGCCAAGTATATCTACATTGTAGATACCAGACCCAAGATAAATGCTATGGCCAACAAGGCTGCAGGAAAAGGATACGAAAGCACAGATTTCTATGAGAATGTGAAGTTTCAGTTTGTAGGAATTGAGAACATTCATGTGATGAGACAAAGTCTGCAGAAGATGACTGAGTTGGTCTGTGAGACTCCAGACATTGCAGCAAAGACCTTTGTCAGTGGATTGGATGGCAGTGGATGGTTAAAACACATCAAGGCCATCTTGGATACGTCTATTTTTATTGCCAAGGCCGTAGCAGAAGAGAAAATCAGTGTTGTAGTTCACTGCAGTGATGGCTGGGATCGGACAGCGCAGACATGCTCAATTGCCAGTATCATATTGGATCCTTACTACAGAACAATCCATGGATTTCAGGTGTTGGTTGAGAAAGAATGGCTCTCTTTTGGACACAAGTTTACTGACAGGTGTGGGTTCCTTCAATCAGATGGGAAGGAGACTTCACCGGTGTTTTTGCAGTTTTTGGAAGGAGTTTGGCAATTGCTGGAGCAGTTTCCATTTGCTTTTCAGTTCAATGAAAGATTTCTTCTCACACTTCATGACCACTTGTACTCTTGCCAGTTCGGAACTTTTCTTGGAAATTGTGAACGGGAACGCAAGGAACACAGGTTGCCAGAAAAGACATTTTCATTATGGGGCTACATGTGGCAAAATATTAGCGACTACGCTAATCCGCTGTACAGAGGAGGGGATGAGGAATTATTTTGGCCCAGTACATCGCCTCAAGTGCTCAAGTTTTGGCGATCAATGTACAATCGATTCGATAATGACATTCATCCACGTGAAAAAGTAATGGATGCAATAAGCAGCATCATGGATCACAATGACTCCTTACAGGACCAtattaaattcctttcttctCGCATGGAGATGATGAAAGCTCTTTGTAACTCCAGGACTAAGAACTACAGCTGCACAGCTTGTTCTGAGGATAGAAACTTTATAGACATGAAACTTGGTAACTTGATGTATGAAGTACCAGTTGGGAACTCAAGTGATTCAACGCCCCTTGCAAATTCATTAAATGGCGTGGAACTTGACACGGCACAACCAGGCTCACATACTAGTGATGAGGATTCTTTATCCTGGTCATCATCAATTTTTAGCAGTTACACAAGTGATGCTAGTTGCATTAGTCAAGATAGTGGAATTGGTAAGACTGTGCCTGACGACCTCCAGATATCATTGAAGCGTCAGGGTCTGACTGTGGATGACCTGTTGGAGTCTGTACCACCCTTTGTTGTGGAATGGCAGTCTGTCCGGGATGTTTCTCAATGTTTGAATTGTGCATCTCCCATTGATTTTCTCAGCAGAAAGTATCACTGTTGGAACTGTGGAGAAGTGTTCTGTAAACGATGTATTGACAAACAATGCTCACTACCAAGCCATTACTCAGATAATCGTGTCCCAGTCTGCAAGAATTGCTACAAGGCCCTCAAGAAATATAAATTAAATTCCAACCACAAACAGATGGCAAAAAAATGTTAGTTATCATGGAACTGTAGGATAATTTTGATAGACAATTTTGCTAATTTTAAGTTCATTGTCAACTCACTTTCCCAGCCCTTTGTAGGAATAACAAATTAGTTTTCCATTAGGAAAGCCTGGAAATACCCAAGCTTCCCTGCAGTTTAGGATGGGGAGAATTAACCTAGATTTATGTGCCTCAATTTTTGATGTTGCAAT

Protein

Uniprot

Uniprot term	Description
Q5F452	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR8 OS=Gallus gallus OX=9031 GN=MTMR8 PE=2 SV=1
Q8VE11	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR6 OS=Mus musculus OX=10090 GN=Mtmr6 PE=1 SV=1
Q6TEL0	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR8 OS=Danio rerio OX=7955 GN=mtmr8 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06602	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR010569	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR030564	Family	Myotubularin family	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10807	MYOTUBULARIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004438	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0106018	Molecular Function	phosphatidylinositol-3,5-bisphosphate phosphatase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan