Detailed information of aflo_s0265.g3.t1 in Acropora florida

Genomic Location: sc0000265_pilon:31246...46917
NR annotation: XP_044175198.1, nucleotide-binding oligomerization domain-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
C6FG12Protein NLRC5 OS=Ictalurus punctatus OX=7998 GN=nlrc5 PE=2 SV=1
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17776NLRC4_HD2NLRC4 helical domain HD2DomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR041267DomainNACHT, LRR and PYD domains-containing protein, helical domain HD2Interproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP