Gene detail

Detailed information of aflo_s0266.g2.t2 in Acropora florida

Genomic Location: sc0000266_pilon:15311...39835
NR annotation: XP_015750589.1, PREDICTED: uncharacterized protein LOC107330491 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0266.g2.t2

GCTTGTCAAAGCAAATTAATGCAGGTACGTTATCCACTAAGTTATAAGCTGCAAAAATTATAAACTTTTACCATTTGAGGGAAGCCTTCAGCAAGTTAACAAAATGTGGAAGGGAAACGTTTGCTCCGCTGTTGTGCTGCTGTTAATGTTAGCTACTCAGGCTGTGGTTTCACAGAGACAAAGCTTAAAGTCTGCAGAGGACGAGCCCTTAACAGGTACTCGCCGTACCCTAAGCACCACAGCGCAAGCGTTTTTCGCCGGCTCGATGGCTCCCCAAAACCTGCCGAATAGTGCCTTGCCAACTTCAATTGTAATAGAGCAGACATTACGACGGACTGGAAGCACGGTGTATTTTGTCACGCTATTTGATAAGACCAGAACCATCCCTTTGTATTCGGCCTACAAGGTGACCCCAAGTCAGGCGACAGCTATTGGAACGTATAACAGAAAGCAGGGGTCCAGCGCCTGGAGAACTACTCCCGGAGCTACTGGTGTAAATAACGCTTACAAAGGCGCAATCAAGACTTGCAAGGCAAAGGCAGGAAGCCCTCAGCTCAGCCGAGGTCATATGAACCCTTCAGCCATAAATTCGTTTGATATAAATCACATGAAAGTTACATACACTTTGTCAAACGCAGTACCACAGTTCCAGATGTTTAACAGCTTCGAGTGGGGGAACCAAGAAACAAAGATACGCAATTACGCTAAAAATACATGTGGAAGCGGTAGGGGAACGCTTTACATGCTGACGGGGATATCAGATATTGGCCTGACAATACCATCAGGTGGCGGAAATCCTGTACAAGACACCACCATTACGCAGAAATGTCCTGAATACACATTTACAAGTGGCGGTAATACTCATAAGCTGGGTACTCCTCGTGCTGTTTGGTCAGCAGGGTGTTGCGTGTGGCCGACATCAACAAGACCTGTGCCGCCGACAAAAAAACCGAGACGGCAACCAGTCACATCGTTTGCAGTCATGAGTAACAACCATCCTGACCAAACTACTCAGGCTGCGGTTTCACAGAGACAAAGCTTAAAGTTTGCAGAGGACGAGTCCTTAACAGGTAGTCGCCGTACCCTAAGCGCTACAGCGCAAGCGTTTTTCGCCGGCTTGATGGCTCCCCAGAACCTGCCAAAAAGTGCATTGACAACTTCAGTTGTAGTAGAGCAGAAATTAGGACAGACTGGAAACACGGTGTATTTTGTTACACTATTTGATGAGACCAGAACCATCCCTTTGTATTCGGCCTACAAGGTGACCCCAAGTCAGGGGAAAGCTATTGGAACGCATAAAAGAAATGATGTGTCAGGCAATTGGAGGACTGCTCCCGGAGTTACTGGTTTAAATAATGCTTACAAAGCAGCAATCAGGATTTGCAAGGCAAAGGCAGGAAGCCCTCAGCTCAGCCGAGGTCATATGAACCCTTCAGCCATAAATTCGTTTGATTTAAATCACATGAGAGCTACATACACTTTGTCAAACGCAGTACCACAGTTCCAGAAGTTTAACAGCAAGCAATGGGGGACCCAAGAAGAAAAAATACGCAATTACGCCAAAAATACATGTGCAAACGGTGGCGGAACCCTTTACATGCTGACGGGGATATCAGATATTGGCCTGAAAATACCATCAGGTGGCGGAAATCCTGTTCAAGACACCTCCATTATGCAGAAATGTCCTCAATACACATTTACAGGTGGCCGTAAGAGTCATACGCTGGGTACTCCTCGCGCGGTTTGGTCAGCAGGGTGTTGCGTGTGGCCGAAACCAGCAACACCTGTGCCTCCGACAAAAAAACCGAGACGGTTTCCAGTCGAATCATTTGCAGTCATGAGTAATAACCATCCCGATGAAGGTCAGCTGCACATCAAGCAGATGAGTGTCGCAGACTTGGAAACGCTCCTTACTCCCACAGCAGCGTTGAAAGTAAACTTGTTTCCAGGCAACAGTGATTGTAGATTGTCCAAATATAACCGTATGCTCTAACTCCACAAGGGGATAAATTCGTAAGGCGCGCGTACGTTAAAATTTCGACGCGTTTAAAAATGAATATTAAGTTAACATTTGTCCTCTCAAAATGTAATTAGCGACTGCATGAAGCTAATAAAATTACATTTTAAAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01223	Endonuclease_NS	DNA/RNA non-specific endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001604	Domain	DNA/RNA non-specific endonuclease	Interproscan
IPR044929	Homologous_superfamily	DNA/RNA non-specific endonuclease superfamily	Interproscan
IPR039015	Family	Endonuclease domain-containing 1 protein	Interproscan
IPR020821	Domain	Extracellular Endonuclease, subunit A	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21472	ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan