Detailed information of aflo_s0273.g19.t2 in Acropora florida

Genomic Location: sc0000273_pilon:390364...422105
NR annotation: XP_015774966.1, PREDICTED: protein PAT1 homolog 1-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86TB9Protein PAT1 homolog 1 OS=Homo sapiens OX=9606 GN=PATL1 PE=1 SV=2
Q5R8Q4Protein PAT1 homolog 1 OS=Pongo abelii OX=9601 GN=PATL1 PE=2 SV=1
B5DF93Protein PAT1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Patl1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09770PAT1Topoisomerase II-associated protein PAT1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039900FamilyPat1-likeInterproscan
IPR019167DomainmRNA decay factor PAT1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21551TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000290Biological Processdeadenylation-dependent decapping of nuclear-transcribed mRNAInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0033962Biological ProcessP-body assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12617PATL1, PAT1; DNA topoisomerase 2-associated protein PAT1-Messenger RNA biogenesisko03019deepkoala

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