Gene detail

Detailed information of aflo_s0327.g7.t2 in Acropora florida

Genomic Location: sc0000327_pilon:141096...155344
NR annotation: XP_044184033.1, kinesin-like protein KIF18A isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0327.g7.t2

ATGGTTCAACCTTCCTCAAGAACAAGATCACAACGAGAGGGGAACAGTAACATGAAAGTTGTTGTTCGAGTGCGGCCATTAAACAGCGTAGAAGTCACTAAACAGTCTTCCACGTCCGTGCGTGTGATGGACGAACGTGTTCTCGTTTTCGACCCGAAGGACGATTCAATTGATTATTTTCAGGGAGATCAGAGAAGAAGGAAGTCTCAATTCTTGACAAGACGAGCAAGGGACTTAAGATTCATGTTCGATCGAGTGTTCGATAGAGGGGCCAGCAATAGAGATGTTTTCGAACAGACAACTAATACCATCATCGATGGAGTTCTCGGTGGATACAACTGTTCTGTGTTCGCGTATGGAGCTACAGGGGCAGGGAAAACATTTACAATGTTAGGAGATTCCACTAACCCTGGAGTTATGTTTTTGACTATGATGGAATTGTACAGCAAAATCAACGCTTCCAAAGACGAGAAAAGTTCTGATGTGGCGGTATCCTATCTCGAGGTTTATAACGAGACAATTAGAGATCTTCTTATGCCAGGCCAGCCACTTGTTGTACGCGAGGATCCACAGAGAGGGGTGTGTGTCAGTGGTCTTACACTTCACAAGCCTGTATCAGCAGAAGAGCTGCTTGGGATGCTGGAATTTGGAAATAACAACAGGACGCAGCATCCCACGGATGCAAATGCTCAATCCTCAAGGTCACATGCTGTGTTTCAGGTATTTGTGAGACAAAGGGACAGAACAGCAAGTTTAAAGGCCAAATTCACCATGGGAAAAATGTCCCTGATTGACTTGGCAGGATCAGAGCGTGCTATAGTCACGTCCAATAGTGGTGCGCGGTTTAGAGAAGGTGCTAACATTAACAAGTCTTTGCTTGCCCTTGGAAACTGCATTAATGCTCTTTCTGATAAAGAGAACAAGGCTGGACATATTCCATACAGAGATAGCAAGTTAACAAGACTCCTTAAAGACTCCCTTGGAGGAAACTGCAGGACTGTTATGATTGCAGCTGTCAGTCCATCAGACCTGAGTTATGAAGACACATATAATACACTGAAGTACGCTGACCGTGCTATGAACATAAAATGCAAAGTCATCAAAAATGAGGTGTCAGTTGATATGCATGTCAGTCGTTACGCCAAGATAGTTGAGGAGCTCAGACTAGAGGCTGGAATTTTCCATACTTGCAAATACTTAAAGCCTGTTTACCAAGCTAAGTCTGATCCCTATTATAAAGTGCAAACAGACAGTATTTCAGGAACACCACAAACAAAAACACCCATTAGGAAACGCAGGTTCAACACACCAGTTTTTGACCTAACAACGCCATGCCAGGGTGCTTTGTCTGTCTCAGTTGATGCAAAAAGGACATTTGCCCCCTCAGCTACAGCAAGTACGTCAGCAGTGGACATCAATCTTGCAAATACATGCATTTCCCTGACTAAAAGGTTTGAGGCCTTTTCTCCAGCAGCAGAGTCAGTCAAAACAATGGGACAAAGTTCTACAGGACAAGGGCCCATTGCTTCATCAATCGTTATCTCTGGTGTTCAACCAAACAGGAAGGATGTACCGGTAACACCTTTTAGGGAACCATTATCTCGCGCAAATTCTACATCTCCTGCAACGCTGCGGACTCCAATAAATTTGAATAAATCATCAAAATTTGCTGCAACAAGTAGCACTCCTCATCTCAGAATTGGTTGCTGGGCTGATAAACCTGCTGTGGAGGATACAAAAGGCAAGATGTGCAGTGCAAAACCCTTGAGAGAATCAAACAGCCTTGATATCTCTGGAATGCTGCCACTTCAACAAAGTCCTGAAGACAAGGAGCAGTACGTGAAGCCAGTATCACAGATGAAAAGACCTCCTGTGAATGATCCTCTGTCAACACCTCTCAGAGAACTGCCAGTCAACAAGAAGACAGAGATTAAAGGTGAACTGCCTTCAATTTTGTCCCAATTAACAAATCCGCTTAGTAAAGACAAATCTAAAAACCAGCAGAAGAGTAAAGATATGATGCCAAAAAGGGTTAGCAAAGCTACAAAAGAAAATGAAAATATGCAGCTGTCAAAGACGCCTTTACGATCATCATCCAGTGTCTTAGAGCTTGACAGGCTCCATTCAAAGAAAATTAAGAAGCACATAAATGGTTTGAGAAGAGCAGTGAGCAGTACCAGCATTGGGACAAGCAGAAACTTTGCCCCAAGATCATCGTAA

Transcript

aflo_s0327.g7.t2

ATAGGCACGTAGTACGGATCATTTTTCCAAAATATCGGGATGCGCTAGCAAGAGCTATTATTCCCACGCCTTATGATTGGAGAAATATTGTTTGGAAACTAATAAGGAAAAGGTTTGATCTCTAACATTTACACAACGAAAGAAAATACTGCAAGAAAATACTGCAATAGACGAACAACATGGTTCAACCTTCCTCAAGAACAAGATCACAACGAGAGGGGAACAGTAACATGAAAGTTGTTGTTCGAGTGCGGCCATTAAACAGCGTAGAAGTCACTAAACAGTCTTCCACGTCCGTGCGTGTGATGGACGAACGTGTTCTCGTTTTCGACCCGAAGGACGATTCAATTGATTATTTTCAGGGAGATCAGAGAAGAAGGAAGTCTCAATTCTTGACAAGACGAGCAAGGGACTTAAGATTCATGTTCGATCGAGTGTTCGATAGAGGGGCCAGCAATAGAGATGTTTTCGAACAGACAACTAATACCATCATCGATGGAGTTCTCGGTGGATACAACTGTTCTGTGTTCGCGTATGGAGCTACAGGGGCAGGGAAAACATTTACAATGTTAGGAGATTCCACTAACCCTGGAGTTATGTTTTTGACTATGATGGAATTGTACAGCAAAATCAACGCTTCCAAAGACGAGAAAAGTTCTGATGTGGCGGTATCCTATCTCGAGGTTTATAACGAGACAATTAGAGATCTTCTTATGCCAGGCCAGCCACTTGTTGTACGCGAGGATCCACAGAGAGGGGTGTGTGTCAGTGGTCTTACACTTCACAAGCCTGTATCAGCAGAAGAGCTGCTTGGGATGCTGGAATTTGGAAATAACAACAGGACGCAGCATCCCACGGATGCAAATGCTCAATCCTCAAGGTCACATGCTGTGTTTCAGGTATTTGTGAGACAAAGGGACAGAACAGCAAGTTTAAAGGCCAAATTCACCATGGGAAAAATGTCCCTGATTGACTTGGCAGGATCAGAGCGTGCTATAGTCACGTCCAATAGTGGTGCGCGGTTTAGAGAAGGTGCTAACATTAACAAGTCTTTGCTTGCCCTTGGAAACTGCATTAATGCTCTTTCTGATAAAGAGAACAAGGCTGGACATATTCCATACAGAGATAGCAAGTTAACAAGACTCCTTAAAGACTCCCTTGGAGGAAACTGCAGGACTGTTATGATTGCAGCTGTCAGTCCATCAGACCTGAGTTATGAAGACACATATAATACACTGAAGTACGCTGACCGTGCTATGAACATAAAATGCAAAGTCATCAAAAATGAGGTGTCAGTTGATATGCATGTCAGTCGTTACGCCAAGATAGTTGAGGAGCTCAGACTAGAGGCTGGAATTTTCCATACTTGCAAATACTTAAAGCCTGTTTACCAAGCTAAGTCTGATCCCTATTATAAAGTGCAAACAGACAGTATTTCAGGAACACCACAAACAAAAACACCCATTAGGAAACGCAGGTTCAACACACCAGTTTTTGACCTAACAACGCCATGCCAGGGTGCTTTGTCTGTCTCAGTTGATGCAAAAAGGACATTTGCCCCCTCAGCTACAGCAAGTACGTCAGCAGTGGACATCAATCTTGCAAATACATGCATTTCCCTGACTAAAAGGTTTGAGGCCTTTTCTCCAGCAGCAGAGTCAGTCAAAACAATGGGACAAAGTTCTACAGGACAAGGGCCCATTGCTTCATCAATCGTTATCTCTGGTGTTCAACCAAACAGGAAGGATGTACCGGTAACACCTTTTAGGGAACCATTATCTCGCGCAAATTCTACATCTCCTGCAACGCTGCGGACTCCAATAAATTTGAATAAATCATCAAAATTTGCTGCAACAAGTAGCACTCCTCATCTCAGAATTGGTTGCTGGGCTGATAAACCTGCTGTGGAGGATACAAAAGGCAAGATGTGCAGTGCAAAACCCTTGAGAGAATCAAACAGCCTTGATATCTCTGGAATGCTGCCACTTCAACAAAGTCCTGAAGACAAGGAGCAGTACGTGAAGCCAGTATCACAGATGAAAAGACCTCCTGTGAATGATCCTCTGTCAACACCTCTCAGAGAACTGCCAGTCAACAAGAAGACAGAGATTAAAGGTGAACTGCCTTCAATTTTGTCCCAATTAACAAATCCGCTTAGTAAAGACAAATCTAAAAACCAGCAGAAGAGTAAAGATATGATGCCAAAAAGGGTTAGCAAAGCTACAAAAGAAAATGAAAATATGCAGCTGTCAAAGACGCCTTTACGATCATCATCCAGTGTCTTAGAGCTTGACAGGCTCCATTCAAAGAAAATTAAGAAGCACATAAATGGTTTGAGAAGAGCAGTGAGCAGTACCAGCATTGGGACAAGCAGAAACTTTGCCCCAAGATCATCGTAAGTATTAATTGTCATTAAACTGGACAAATTTTTCTTGTAGACATGATGAGTGCAGCCCAATTTTAACATCAGTGGGTCAGCAATATCAGCACAATCCTACGGGTGTTAGTGATTACTTTCATGACCAAGGTGAATGTGTGCTATTTACCAGAACTTACCAAAAACAAAGATTTGAGTAAAATACCCCAGAAAAGTAAGCATTTGAATTTGCAACCTTTCACAGCAAGACCAAGATGGCAATAGAATGATTGATGTCAC

Protein

Uniprot

Uniprot term	Description
Q5ZLK6	Kinesin-like protein KIF18B OS=Gallus gallus OX=9031 GN=KIF18B PE=2 SV=1
Q6PFD6	Kinesin-like protein KIF18B OS=Mus musculus OX=10090 GN=Kif18b PE=2 SV=2
Q4KLL9	Kinesin-like protein KIF18B OS=Rattus norvegicus OX=10116 GN=Kif18b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027640	Family	Kinesin-like protein	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10401	KIF18A; kinesin family member 18A	-	Cytoskeleton proteins	ko04812	deepkoala