Detailed information of aflo_s0340.g3.t1 in Acropora florida

Genomic Location: sc0000340_pilon:127426...210645
NR annotation: XP_015772515.1, PREDICTED: uncharacterized protein LOC107350789 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q7TPD3Roundabout homolog 2 OS=Mus musculus OX=10090 GN=Robo2 PE=1 SV=2
Q9HCK4Roundabout homolog 2 OS=Homo sapiens OX=9606 GN=ROBO2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan

TOP