Detailed information of aflo_s0349.g10.t2 in Acropora florida

Genomic Location: sc0000349_pilon:113916...134112
NR annotation: XP_044162701.1, protein jagged-1b-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P78504Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3
Q9Y219Protein jagged-2 OS=Homo sapiens OX=9606 GN=JAG2 PE=1 SV=3
Q9QYE5Protein jagged-2 OS=Mus musculus OX=10090 GN=Jag2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21700DL-JAG_EGF-likeDelta-like/Jagged, EGF-like domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR026219FamilyJagged/Serrate proteinInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR001007DomainVWFC domainInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007154Biological Processcell communicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06052JAG1, CD339; jagged-1-CD moleculesko04090deepkoala

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