Detailed information of aflo_s0723.g2.t1 in Acropora florida

Genomic Location: sc0000723_pilon:35606...72254
NR annotation: XP_044176655.1, sacsin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NZJ4Sacsin OS=Homo sapiens OX=9606 GN=SACS PE=1 SV=2
Q9JLC8Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=2
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF05168HEPNHEPN domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052972FamilySacsin chaperone regulatorInterproscan
IPR007842DomainHEPN domainInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15600SACSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030544Molecular FunctionHsp70 protein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17592SACS; sacsin-Protein phosphatases and associated proteinsko01009deepkoala

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