Gene detail

Detailed information of aflo_s0970.g1.t1 in Acropora florida

Genomic Location: sc0000970_pilon:1...26396
NR annotation: XP_015754688.1, PREDICTED: uncharacterized protein LOC107334269 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s0970.g1.t1

ATTTCTCCTCGGTGCAGCTGCTGCGAGATAATGGCACAAAGGGATGCAAGCGAACCAATTCCAATCCCTCAAAGAGACGCTGGTCATCATGCCCCACAGATGCTGGAAAATGATGGAGTTGAAGATACATATTTACAGGGTCTGTCAAAACTGCGTCACATGTTTCCACAGTTTGTTAATCGAAAAACTGACGAACTTTCCTATATTGTCGAGTGTCTTGATCCAGAAAATAAGCAGTGTCAGGGCGTGTTCATAGATGGAGCTCCAGGGATTGGCAAGACAATCCTTGCGACCGAGGCTGCTAACAAGTTACGTAACAATAACAGACATGTCGTTGTTGCCTACATCGAATGCAAGGACATCAGATCATTCGAATCCTTCGCAGGAACGGTTATCGAGCAAATTTGCCGTTCGACTGCTGTAGACGATCCAGCTGCTGAAATAAAGAAGCGCTTGATTGCAAGCAAAGATTATTTTTACATTCTGTTTCTGGACAACTTTGAGTGTTTCGTTGAAGAGAATAATAAACAGCAGGAGGATCAATCTTCGACAGCAGCAGCCTCATCTCGTGATTGTAGAGAAAGAGTCCTAAGTTTTATCGGTGAAATTGCGAACTGCACGACAAACATCAAGTTTCTTGTTACTTCGTCGGAAAAAGTTCCTTTCTTGCCGATGCTAGCAATGAAAAAGATACATTTGAATCCTTTTGATAAAGACGAATCATCTAAGCTCTTGGAAAAAGTACGCCTTGGCGACAAAATATCGgatgaaaaatccgaagaactttgcaagatttgcggtggtattccactggtactccacactttgatctcgtcgcaagaggatctgatcggtctccTGGAATGTTTTGGAAAGTCACCGGAAGAGAGAACAAATTTTTTGTTGAAGATGAAAATAGTGCCAAAAGAAAAGAAGATAGAAGTTTGCTTAGACGTTTGCTTCCAAAGACTGACACCCCAAGCACAACTGACCTTATTACGTTTGTGTCTTTACAGGGGTTTGTTTACTCCAGATAAAGTGGCAAAAATATTTTGCTCTCTGAAGTCAAGTGTGCATAATCTCATAGATAATGTTTTGGACTTGGGACGGTGCAATCTCTTGCACCTACAAAAATCCCATAATACATTCAAATATACATTTCTCACGGTCATTCGAGAACATTTCAAACTCAAGGCAGAGCAGGAATATCACAAAGAGATCCAACATGCTCGTGGGCTGCTGATTGATTACCTCATTTCTTTCTTGAAAGAGACTTTCAAGTTGTTCTTGGGCAAAAATAAAGTGAAAACGGCTATCGAGGAGTTTTCAGCGGAAAAAGAGAACGTGATGCAACTGGTTGAATGGATTGACAAGGGTGAAATGGATGAAGAGCGAATTAAGAAATGCATCGACGTCTTTAATGTGGCAGGAGAGATGGTTGCGAAGATGATGGCAAAGTTCAATTATAGATATGTTTATGAATCTTTGGCTGACAAGTGCAAAGAAATGGGAGACCAGCGGAGACTGGCTGAATGTCTGACTTCCCTTGGGATCAAGGAAATCTTCAACTGCGTATGCGCAACCGGTCTGTGCGACAAAGCTATTAAGCAAGCTCGACTCTGTTTGGATGAAGCTGACGAGATCCAGACTCACCTTCAAGTCAACAAAGGTAACAGCCGTGCCCAGTGCCTAGCTAAGCTTGGCAGTTGTCTTGTAAGAAGTGATGACACAGAGCGAGGGATGGCCATGATTGAGGAGGCGATACGTATCAGAAAGGCTGCAGTCGAAACACCTGATGATCATGAGGAAGAAGGCGGCGAGAATGTCTGCTATGTCATGCTGGGTGCAACATATAGTGACAAGGCAGttgctctttcttttgaaaagcgtcatcaagaggctgttgacatcagaaaaaatcaagtgatgccgatttacagagaaagattgggagaccatcctttcactgccaccatcctcaacaatttgtccaataatcatcgcgacctgggagaatttgaggctgctgaggagtacgctaaacaagccctagatattaggcgtgaattattgatggaccacagggacaccatcaaatccttgtttgatcttggaatggcactaaaagcgaacaaaaggttcagagaagcaaaacattttttagaacaatgtaaggctattcaggagaaagtggtgaatgatagcaccctcgagaagaagtaa

Transcript

aflo_s0970.g1.t1

AATTTCTCCTCGGTGCAGCTGCTGCGAGATAATGGCACAAAGGGATGCAAGCGAACCAATTCCAATCCCTCAAAGAGACGCTGGTCATCATGCCCCACAGATGCTGGAAAATGATGGAGTTGAAGATACATATTTACAGGGTCTGTCAAAACTGCGTCACATGTTTCCACAGTTTGTTAATCGAAAAACTGACGAACTTTCCTATATTGTCGAGTGTCTTGATCCAGAAAATAAGCAGTGTCAGGGCGTGTTCATAGATGGAGCTCCAGGGATTGGCAAGACAATCCTTGCGACCGAGGCTGCTAACAAGTTACGTAACAATAACAGACATGTCGTTGTTGCCTACATCGAATGCAAGGACATCAGATCATTCGAATCCTTCGCAGGAACGGTTATCGAGCAAATTTGCCGTTCGACTGCTGTAGACGATCCAGCTGCTGAAATAAAGAAGCGCTTGATTGCAAGCAAAGATTATTTTTACATTCTGTTTCTGGACAACTTTGAGTGTTTCGTTGAAGAGAATAATAAACAGCAGGAGGATCAATCTTCGACAGCAGCAGCCTCATCTCGTGATTGTAGAGAAAGAGTCCTAAGTTTTATCGGTGAAATTGCGAACTGCACGACAAACATCAAGTTTCTTGTTACTTCGTCGGAAAAAGTTCCTTTCTTGCCGATGCTAGCAATGAAAAAGATACATTTGAATCCTTTTGATAAAGACGAATCATCTAAGCTCTTGGAAAAAGTACGCCTTGGCGACAAAATATCGgatgaaaaatccgaagaactttgcaagatttgcggtggtattccactggtactccacactttgatctcgtcgcaagaggatctgatcggtctccTGGAATGTTTTGGAAAGTCACCGGAAGAGAGAACAAATTTTTTGTTGAAGATGAAAATAGTGCCAAAAGAAAAGAAGATAGAAGTTTGCTTAGACGTTTGCTTCCAAAGACTGACACCCCAAGCACAACTGACCTTATTACGTTTGTGTCTTTACAGGGGTTTGTTTACTCCAGATAAAGTGGCAAAAATATTTTGCTCTCTGAAGTCAAGTGTGCATAATCTCATAGATAATGTTTTGGACTTGGGACGGTGCAATCTCTTGCACCTACAAAAATCCCATAATACATTCAAATATACATTTCTCACGGTCATTCGAGAACATTTCAAACTCAAGGCAGAGCAGGAATATCACAAAGAGATCCAACATGCTCGTGGGCTGCTGATTGATTACCTCATTTCTTTCTTGAAAGAGACTTTCAAGTTGTTCTTGGGCAAAAATAAAGTGAAAACGGCTATCGAGGAGTTTTCAGCGGAAAAAGAGAACGTGATGCAACTGGTTGAATGGATTGACAAGGGTGAAATGGATGAAGAGCGAATTAAGAAATGCATCGACGTCTTTAATGTGGCAGGAGAGATGGTTGCGAAGATGATGGCAAAGTTCAATTATAGATATGTTTATGAATCTTTGGCTGACAAGTGCAAAGAAATGGGAGACCAGCGGAGACTGGCTGAATGTCTGACTTCCCTTGGGATCAAGGAAATCTTCAACTGCGTATGCGCAACCGGTCTGTGCGACAAAGCTATTAAGCAAGCTCGACTCTGTTTGGATGAAGCTGACGAGATCCAGACTCACCTTCAAGTCAACAAAGGTAACAGCCGTGCCCAGTGCCTAGCTAAGCTTGGCAGTTGTCTTGTAAGAAGTGATGACACAGAGCGAGGGATGGCCATGATTGAGGAGGCGATACGTATCAGAAAGGCTGCAGTCGAAACACCTGATGATCATGAGGAAGAAGGCGGCGAGAATGTCTGCTATGTCATGCTGGGTGCAACATATAGTGACAAGGCAGttgctctttcttttgaaaagcgtcatcaagaggctgttgacatcagaaaaaatcaagtgatgccgatttacagagaaagattgggagaccatcctttcactgccaccatcctcaacaatttgtccaataatcatcgcgacctgggagaatttgaggctgctgaggagtacgctaaacaagccctagatattaggcgtgaattattgatggaccacagggacaccatcaaatccttgtttgatcttggaatggcactaaaagcgaacaaaaggttcagagaagcaaaacattttttagaacaatgtaaggctattcaggagaaagtggtgaatgatagcaccctcgagaagaagtaagtttattagacttacggacaagaagagtcccataaatgatttttcaaacatagggggaataatggtagagccataacaagggctctcactttccgtgattgcgataaaattgacgaaggtct

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan