Gene detail

Detailed information of aflo_s0977.g2.t1 in Acropora florida

Genomic Location: sc0000977_pilon:9650...34945
NR annotation: XP_029191418.2, trifunctional enzyme subunit alpha, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s0977.g2.t1

GGCGAAAACCCGCATAATTTTGAAGAACGGAAAGAAAGTTAAAGAACTTCTCTGAAGTTTGCATCGAAATCGCAATGCTCTCTTCTACTCTCCGGCTTGGAATTAGGCAACTTTCGGTCGCCTCTAGGAGGCACCTTTTGCCAGCAATCAATGCAGGAACTCATCTCCGCTTCAATCAGACAGCATCAGGGGATAGCTGTGTCAAGTGTAACATCACAAGTGATGGTGTGGCTGTTGTTAGATTTGATACGCCAGGATCAAAGGTCAATGTCTTATCAGAGAAGTTTACAACTGATCTGGCTGAGGTTATTCAAGATGTGGAATCTAATGCTGATGTCAAGAGTATTGTTCTTTTGTCCGCTAAACCTGGCTGTTGGATTGCTGGAGCAGACATTAACATGCTGAATGCTGGTGACACTGCCAAGAAGGTTGAAGAAATGTCTGCTAATGGCCAGAAACTCATGCAACATGTTGAGGATAGTAAAAAACCATTTGTGGCTGCTATCATGGGATCTTGCCTTGGCGGCGGCCTTGAGCTTGCCTTGAGTTGTCACTACAGAGTTGCTGTAGATAACTCTTCCACTGTCCTTGGTGCTCCAGAGGTTATGTTGGGTCTGCTACCAGGTGCTGGAGGAACACAAAGGCTCCCTTCACTTGTTGGTCTACCTGATTCTTTGGACATGATGCTCACAGGCAAGAATATCAAAGCAGGCAAAGCAAAAAGGATGGGTCTTGTTGATGGGCTTGTCAAACCACTTGGTCCTGGTCTAAAACCTCCCTTAGAGAACACCTTGCAGTATCTTGAAGAAATTGCTATCCAGACAGCCAAGAATTTGGCAGGTGGATCTGTTAAATCTGATAGGTCACGTTCTTGGGGAAATATGAAAGACTTACAGTACAAAATTACAACTGAAACAAAATTTGGACGTGACTTTGTTTTCAAGAAAGCGAAACAAACAGTTATGAAGCAAACTGGTGGTCTTTATCCTGCTCCATTAAAAATTCTTGAAGTTGTCAGAAGTGGCCTCGAAGAAGGACACCAAAAAGGCTTCAAAAAGGAAGCTGAGTTAAACCCTTCAAAAACCAATGGACACAAAGTCATGTCTTTCACTGTTGCTGTCATTGGAGCTGGCCTTATGGGTGCAGGCATAGCACAGGTCAGTCTTCAAAAAGGCCAGAATGTGGTCATGAAAGACAACATTTTGGAAGGTCTCACTCGAGGTCAGGAACAAATTTACAAAGGGCTTAATGGCCGTGTGAAAAAGAAGGCAATGACATCGTTTGAAAGGGACAATATGATGTCCAAACTGTCAGGACAGTTAGACTTTAGGAACTTTGACAAAGTTGACATGGTAATTGAAGCTGTCTTTGAAGATCTCAACCTCAAGCACAAAGTCATTAAGGAAATAGAGAAGGTCATTCCAGAACATTGTGTGTTTGCATCCAACACTTCAGCACTTCCTATTCACAAGGTTGCTGAAGCAAGCATAAGACCTGAAAAGGTTGTTGGAATGCATTACTTTTCTCCTGTCGAGAAAATGCCACTTTTGGAAATAATCACTACAGATAAAACCTCAAATGACACAGCAGCGGCTGCTGTTAGCGTTGGTCTGAAACAAGGAAAAACAGTAATTGTAGTTAAGGATGGTCCTGGGTTTTACACAACAAGAATCTTGGCACCAACACTGGCTGAAGCAGTTGCTCTTTTACAGGAGGGTGTTGGTCCAAAGGAATTGGATAGTCTAACCAAGCAGTTTGGATTTCCAGTTGGATCAGCAACTTTAGCTGATGAAGTTGGCATTGATGTAGCAGCACACGTAGCAGAAGATCTCCACAAAGCATTTGGTGAAAGATTTGGTGGTGGAAACCCAGAACTATTGAAAGCTATGGTTGATGGCGGACATTTAGGGAGAAAATCTGGAAAGGGCTTTTTTATCTACAGTGGAAAGAGCAGCAAGCGAGAAGTCAATGGGGAAGTGGAAAAACTGCTTAAAGAATTTGCAATTCCCAAGAGAGGGAGTCATGACCCTGAAGAGATACAGATGAGATTAGCATCAAGATTTGTAAATGAATCAATACTTTGTCTACAGGAAGGAATACTGAAAAATCCAGTTGACGGAGACATAGGTGCTGTCTTTGGTCTGGGATTTCCACCATTCCACGGAGGTCCTTTCCGTTACCTTGATGCCTATGGAGCAGATAAGTTTGTGGAAAGAATGCAACGATTGCAGGAAACAGTTGGTGGGGAACGCTTTCAGCCCTGTCAGATGCTTTTGGATTTTGCCAAAGACCCAAGTAAAAAATTTCATAAGAGATGATGAATTGTAAAAATGTGTCACTTATCTACAGAATGCTGAGGCCACAGTACAGTTAAAACTTCCAGAATGGTACACTCCTTTGATGGCAGTAGTTACCGAAAAGATGTGGACTTGAAAATGATGCCATTCGTTGCCAAGTTAACGTAGTAGGCTTTTGTAGTGAATTCAATTATTTTGATGACAGTATTCCTTATCCCAACCACAGTATTTTGTTTTTTGTTTCTTGGTTTTGGAAGGCTTTGTGTAGCATCCTAATGGTTAATTAAAAGAAGTTTTAACTA

Protein

Uniprot

Uniprot term	Description
P40939	Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=HADHA PE=1 SV=2
Q64428	Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2
Q8BMS1	Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR050136	Family	Fatty acid oxidation complex subunit alpha	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43612	TRIFUNCTIONAL ENZYME SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0016507	Cellular Component	mitochondrial fatty acid beta-oxidation multienzyme complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07515	HADHA; enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase	EC:4.2.1.17 EC:1.1.1.211	Caprolactam degradation	ko00930	deepkoala