Gene detail

Detailed information of aflo_s1054.g1.t1 in Acropora florida

Genomic Location: sc0001054_pilon:9156...22162
NR annotation: XP_044174686.1, uncharacterized protein LOC114949010 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s1054.g1.t1

GTAGAGCAGCGAGCAGTGATAACAGTGCTAACCTGAAAGAGCAGAGCAACAAAGATAAGAGCATGGTGAAAATGGATGACAGCAGTGTCAGCAGCACTAAGTTAGAGAAAGACAAAAGTAGGGAACGCAGTGGCGACAGCGCCAATATGGAGGTACAAATGGAAGGCGGTGACAACAGTTGTGATAGCAGTTGTACTCGCCTTCATTTGCAGAGTAACAAGTGCAGCCTTACCACCAATGAACTCTTTCCAGTAAATATATCAACCTCTCCAGATATCTCTTTTATGAATCAAAACAACTGCCTTTCCATGAAGTCTTTTCAACGATTTCAGCAATGGAAACTTGGCTTAAAACAAGAAGAATGCTGGATCAATGACGAGGGGATGAATACATACAATGCGTTTCTTGCCAGAAAGTTTAAAAAAATGATTGTCAACCTGATCACCAAGTCACTGTGTCTTTATGACTCTACTGAGTGTGCAGATGATGATCCTGTAAATGCTGATCACTTCCAAGCTATAAAAAAGTTCATTCAGATAGCTTACAATTTTTGGGGGAAAACGTGGATTTCCCAAGAATGGAAGCAGGGCATTGCAGGAGAAACCCCAAAGCAATCAAATGCTTTTGACTGTGGAATATTTTCGTTAAAGTTTGTGGACCACATTATATCTGGAAAACCTTTGTCTTTCAGTCAGGACGACATGCCAAGGTTTAGAGAAGACATGGCTAGAGAAATAATAACAGTGGGACAGAGATCTGATGATTATAAGCATCAAGATGAACAAACACATCAACATCCAGATTGTGCAGCTGACATTCTATTTACACTCAAAGATCAGCTTTTAAATGACCGGCCAGCTTGCAAAATTCAAGTTAAAAGAAAGGATTGTGAAGCTGATTTAAACAGTGACAAGAACTTTCAAGTTGCAAATTCAGAAAGTGAGGCTGAGTCAGAGGAATTCGATTTTCGTACTACCTACCCAGCTTTATGTGGAGGATCATGCACAAATCCCTCGCTAGAGCTTAAGACTGAAGAGGATGATGTCATTGGAGATACAGATGAAGGCGTTCAGCACTCTAATAGTAAAAGAATGTACAAATTGTCAAGAAAACGGCTAGTTTCCAGTTCCTCCGACGAAGACAATTATTCGTTAAATGTGCCAGGTAAAAGGAAGCAAAACGTAACAAAAAATCGGCTGTTTCCAAGTTCCTCCGACGAAGACAATTATTCGTCAAATGTGCCAGGTAAAAGGAAGCACAAATTAACAAAGAAACGGTTGTTTTCCTGTCCCTCCGGCGAAGATAAAAGTGCGTCAGATGTGGCAGAGCTTAAGACTGAAGAGGATGATGTCATTGGAGATACAGATGAAGGCGTTCAGCACTCTAATAGTAAAACAAAGGAAAACGTAACAAGAAATCGGCTGTTTCCAAGTTCCTCCGAGGAAGACAATAATTCGTCAAATGTGCCAGTGACCAAAGTTCAACTGAAGCTGATGACGGAACTAGCTCAGCTCAAAGACAATCCACCAAAAAGAACAACGCCAAAGCTCAAAAGTCAAAAGAACCCAAGAAAATCAGAAAACAAAGCAGAAAATCCAAGGAGGGCGACTGTTCAATAGAAGTGTCCAAAAAGTCAGTTCCTCATAAGTCATGGACAGGAGAAGAAAAGGAAGCAGTCTTGAAGTATCTTGGACACTGGGTCAGACGAGAGCGTATACCAGGGAAACTAGAATGTGAGCAATGTATCTCCAAAGCAAATGGCGTTCTGGATCACAGAAAATGGTCAGACGTTAAATTTTTCATTAAGAACCAGATCGACAAAAGAAGGAAGGTCCTTGCGCCTAAGAATTAGAGCTTTGGCTTGTTATTTCAGTTGCCAAGTTTATTGCAGCCTCTTTTTCAAAGCGAGTGGGCTAATTTCTTTAAAAAAAAAGCTGTTGTGTTGTGTCGGTGGGGAGAATTTTTGGTTTGTCATCTACCTTGATAAACCGTACCAAACTTTCCTTTTTAAAGCCACTCAAAGTGTGAAGTCTTCCTCATAGTCCTGAAACTATAGAGTCGTCAATCCTGTGCTTTTAAATTGAATGTTTAATTATAGCAACGTGAAGAAGAAATAGTTTGCAGATAAAAAAGAATGCACAGT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12606	SENTRIN/SUMO-SPECIFIC PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016926	Biological Process	protein desumoylation	Interproscan
GO:0016929	Molecular Function	deSUMOylase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12778	HORMAD, HOP1; meiosis-specific protein	-	Chromosome and associated proteins	ko03036	deepkoala